G223222



Basic Information


Item Value
gene id G223222
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10387102 ~ 10387372 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU254989
GATCTACACAATCTAGTCCACATTTTAAAGTAAAGGAACGTttttcagacatttttttttttttattaatcaaCATTTTCTCAATTTAAATATCATAATTGGATAAGTCTACACTGAGTTAATACTTGCtggaagcatctttggcagccattacagctgtgaataattttcaataagattctaccaactcTTAGGACAACATATATCCATTAAGTTGCTCAGGCTCAGTAAATTTGTTTGGGGATCATTGACTGATAGCAATATTTCAACC

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU254989 True 271 lncRNA 0.31 1 10387102 10387372

Neighbor


gene id symbol gene type direction distance location
LOC110508823 josd2 coding downstream 157693 10226896 ~ 10229409 (-)
LOC118945753 NA coding downstream 195331 10191357 ~ 10191771 (-)
flcn LOC106577129 coding downstream 206853 10167784 ~ 10180249 (-)
LOC110508798 LOC106577146 coding downstream 223135 10160334 ~ 10163967 (-)
LOC110508790 grwd1 coding downstream 235957 10144533 ~ 10151145 (-)
pitpnc1b LOC106593696 coding upstream 9692 10396551 ~ 10413072 (-)
LOC110508947 LOC106576934 coding upstream 444194 10831566 ~ 10847242 (-)
LOC110508966 u2af2 coding upstream 466330 10853702 ~ 10865262 (-)
LOC110508957 LOC106576897 coding upstream 478163 10865535 ~ 10876129 (-)
LOC110508973 LOC106576890 coding upstream 491337 10878709 ~ 10895912 (-)
G223208 NA non-coding downstream 22458 10364440 ~ 10364644 (-)
G223207 LOC106577106 non-coding downstream 23812 10358753 ~ 10363290 (-)
G223205 LOC106605777 non-coding downstream 31072 10355390 ~ 10356030 (-)
G223204 NA non-coding downstream 32164 10354666 ~ 10354938 (-)
G223203 NA non-coding downstream 32463 10354406 ~ 10354639 (-)
G223225 NA non-coding upstream 4100 10391472 ~ 10391701 (-)
G223227 NA non-coding upstream 4728 10392100 ~ 10392312 (-)
G223230 NA non-coding upstream 7106 10394478 ~ 10394801 (-)
G223477 NA non-coding upstream 27307 10414679 ~ 10415055 (-)
LOC110508724 prpf31 other downstream 363899 10019313 ~ 10024005 (-)
G223070 NA other downstream 372210 10012961 ~ 10014892 (-)
LOC110508696 ndufa3 other downstream 384208 10001415 ~ 10002941 (-)
LOC110534283 LOC106573819 other downstream 703731 9679758 ~ 9689081 (-)
LOC118944443 LOC106573533 other downstream 713663 9665862 ~ 9673439 (-)
znf628 LOC106605829 other upstream 683574 11068525 ~ 11079570 (-)
G223942 LOC106576860 other upstream 784748 11172120 ~ 11174367 (-)
G223969 LOC106605840 other upstream 888545 11275917 ~ 11278628 (-)
LOC110509576 LOC106576947 other upstream 1339990 11727284 ~ 11741584 (-)
G224869 NA other upstream 1365479 11752851 ~ 11753680 (-)

Expression



Co-expression Network