G223228


Basic Information

Item Value
gene id G223228
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10393379 ~ 10393580 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU254995
Taccaagactgtttcaaggacagctttttttccatctacgtaacattgcaaaaatcagaaacgttctgtccaaaaatgatgcagaaaaactaatccatgcttttgttacttctaggttagactactgcaatgctctactttccggctacccggataaagcactacataaactttagttagtgcttaatacggctgctagaat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU254995 True 202 lncRNA 0.38 1 10393379 10393580

Neighbor

gene id symbol gene type direction distance location
LOC110508924 LOC106605777 coding upstream 29706 10340929 ~ 10363673 (+)
LOC110508886 LOC106605776 coding upstream 78844 10306848 ~ 10314535 (+)
LOC110520828 NA coding upstream 87180 10295464 ~ 10306199 (+)
LOC110508875 LOC106605773 coding upstream 106290 10278141 ~ 10287089 (+)
LOC110508845 LOC106605771 coding upstream 117203 10267749 ~ 10276176 (+)
LOC110520829 LOC102782376 coding downstream 38178 10431758 ~ 10605056 (+)
prkcg LOC105019084 coding downstream 267510 10661090 ~ 10701728 (+)
LOC110520833 LOC106575226 coding downstream 323033 10716613 ~ 10767669 (+)
cacng8b LOC106576929 coding downstream 376058 10769638 ~ 10827279 (+)
LOC110508993 LOC106576906 coding downstream 483216 10876757 ~ 10878635 (+)
G223226 NA non-coding upstream 1119 10392037 ~ 10392260 (+)
G222940 NA non-coding upstream 55618 10337369 ~ 10337761 (+)
G222939 NA non-coding upstream 56662 10336383 ~ 10336717 (+)
G222938 NA non-coding upstream 57059 10335843 ~ 10336320 (+)
G223232 NA non-coding downstream 2789 10396369 ~ 10397146 (+)
G223238 NA non-coding downstream 16263 10409843 ~ 10410469 (+)
G223276 NA non-coding downstream 76826 10470406 ~ 10514299 (+)
G223277 NA non-coding downstream 86605 10480185 ~ 10489646 (+)
G223279 NA non-coding downstream 89602 10483182 ~ 10486297 (+)
sphk2 LOC106605743 other upstream 480281 9900809 ~ 9916529 (+)
G222353 LOC106573525 other upstream 711627 9679760 ~ 9681752 (+)
G222345 LOC106594812 other upstream 782240 9606305 ~ 9611139 (+)
G223418 u2af2 other downstream 460122 10853702 ~ 10856200 (+)
G223434 LOC106595748 other downstream 556569 10950149 ~ 10952739 (+)

Expression


Co-expression Network