G223514


Basic Information

Item Value
gene id G223514
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10488255 ~ 10489191 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU255435
tctctcttcctaaccctgtatctctctttctaaacctgtatctctctttctaaccctgtatctctcttgctaaccctgtatctctcttcctaaccctgtatttctcttcctaaacctgtatctctttctaaccctgtatctctcttcctaaccctgtatctctcttcctaaccctgaatctctttctaaacctgtatctctcttcctaacctgtATGTCTCTTtttaaccctgaatctctctttctaaacctgtatctctcttcctaacccggTATCTCTCattctaaccctgaatctctcttcctaacactgaatctctttctaaacctgtatcgctctttctaaacctgtatctctctttttaaccctgtatctctctttctaaacctgtatctctcttcctaaccctgtaactCTCTACctatccctgtatctctctttgtaaacctgtatctctcattCTAACCATGTATCTCTTTTTTAATCCTATTTCTCTGTTTCCAAACCTGTATTCTCTtttcctaaccctgaatctctttctaaccctgaatctctttctaaccctgtatctctctttctaaccctgtatctctctttctaaacctgtatctctctttctaaccatGTATCTCTTTTTTTAACCCTATTTCTCTGTTTCCAAACCTGTattctctcttcctaaccctgtatctctcttcctaacactgtatctctcttcctaaccctgtatttctcttcctaaccctgcatctctcttcctaaccctgtatctctctttctaaccctgaatctctatTTTTAACCCTTTATCTCTGTTTCCAAACCTGTattctctcttcctaaccctgtatctctcttagtaaacctgtatctctctttctaaacctgtatctctc

Function

NR:

description
PREDICTED: uncharacterized protein LOC109137135 isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255435 True 897 lncRNA 0.39 2 10488255 10489191

Neighbor

gene id symbol gene type direction distance location
pitpnc1b LOC106593696 coding downstream 75183 10396551 ~ 10413072 (-)
LOC110508823 josd2 coding downstream 258846 10226896 ~ 10229409 (-)
LOC118945753 NA coding downstream 296484 10191357 ~ 10191771 (-)
flcn LOC106577129 coding downstream 308006 10167784 ~ 10180249 (-)
LOC110508798 LOC106577146 coding downstream 324288 10160334 ~ 10163967 (-)
LOC110508947 LOC106576934 coding upstream 342375 10831566 ~ 10847242 (-)
LOC110508966 u2af2 coding upstream 364511 10853702 ~ 10865262 (-)
LOC110508957 LOC106576897 coding upstream 376344 10865535 ~ 10876129 (-)
LOC110508973 LOC106576890 coding upstream 389518 10878709 ~ 10895912 (-)
si:ch211-149k23.9 LOC106591404 coding upstream 438804 10927995 ~ 10936251 (-)
G223515 NA non-coding downstream 5825 10481495 ~ 10482430 (-)
G223504 NA non-coding downstream 19162 10468853 ~ 10469093 (-)
G223477 NA non-coding downstream 73200 10414679 ~ 10415055 (-)
G223230 NA non-coding downstream 93454 10394478 ~ 10394801 (-)
G223519 NA non-coding upstream 790 10489981 ~ 10492559 (-)
G223521 NA non-coding upstream 12721 10501912 ~ 10503948 (-)
G223527 NA non-coding upstream 28480 10517671 ~ 10517991 (-)
G223529 NA non-coding upstream 29198 10518389 ~ 10574057 (-)
G223531 NA non-coding upstream 30605 10519796 ~ 10523242 (-)
LOC110508724 prpf31 other downstream 465052 10019313 ~ 10024005 (-)
G223070 NA other downstream 473363 10012961 ~ 10014892 (-)
LOC110508696 ndufa3 other downstream 485361 10001415 ~ 10002941 (-)
LOC110534283 LOC106573819 other downstream 804884 9679758 ~ 9689081 (-)
LOC118944443 LOC106573533 other downstream 814816 9665862 ~ 9673439 (-)
znf628 LOC106605829 other upstream 581755 11068525 ~ 11079570 (-)
G223942 LOC106576860 other upstream 682929 11172120 ~ 11174367 (-)
G223969 LOC106605840 other upstream 786726 11275917 ~ 11278628 (-)
LOC110509576 LOC106576947 other upstream 1238171 11727284 ~ 11741584 (-)
G224869 NA other upstream 1263660 11752851 ~ 11753680 (-)

Expression


Co-expression Network