G223601



Basic Information


Item Value
gene id G223601
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10660308 ~ 10660739 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU255534
CTGGGTTACATCTCTCTGGAGAGAGGCAAAGcaagtgatggagggagaagaaggGGGGCCATTTTGCCACCATCACTATGGACTAACACCGACCAACAGTCTAACACTTCTCACAGTGACAGACtgatagagaggaaggagtaaGACAGAAGGATGCTCTTGATAGATCAGTGACTCTAAACAACACCAGTCTATCAAGGGTTAATCATCAATATCATGGTACACAATCTGTTGCCTTACAACTAGCTGACAGGAGTGTTGGCAGTAATGGTTGGACCATATTCAGAACAGCCTGTGGAAGGATCAAGGCCCATTTGATGTGAATAACTTGGTAATTATTCCAGTGGAATAGAGATAGGGAACAAAACTGTTTTTCTAGTGAAATGGAGATAGGGAACAAAACTGTTTTTCTagtggaatggagatagggaA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU255534 True 432 lncRNA 0.43 1 10660308 10660739

Neighbor


gene id symbol gene type direction distance location
pitpnc1b LOC106593696 coding downstream 247236 10396551 ~ 10413072 (-)
LOC110508823 josd2 coding downstream 430899 10226896 ~ 10229409 (-)
LOC118945753 NA coding downstream 468537 10191357 ~ 10191771 (-)
flcn LOC106577129 coding downstream 480059 10167784 ~ 10180249 (-)
LOC110508798 LOC106577146 coding downstream 496341 10160334 ~ 10163967 (-)
LOC110508947 LOC106576934 coding upstream 170827 10831566 ~ 10847242 (-)
LOC110508966 u2af2 coding upstream 192963 10853702 ~ 10865262 (-)
LOC110508957 LOC106576897 coding upstream 204796 10865535 ~ 10876129 (-)
LOC110508973 LOC106576890 coding upstream 217970 10878709 ~ 10895912 (-)
si:ch211-149k23.9 LOC106591404 coding upstream 267256 10927995 ~ 10936251 (-)
G223600 NA non-coding downstream 73 10659887 ~ 10660235 (-)
G223598 NA non-coding downstream 767 10655465 ~ 10659541 (-)
G223597 NA non-coding downstream 5207 10654829 ~ 10655101 (-)
G223596 NA non-coding downstream 9022 10650897 ~ 10651286 (-)
G223560 NA non-coding downstream 93310 10565894 ~ 10566998 (-)
G223627 NA non-coding upstream 36520 10697259 ~ 10698562 (-)
G223652 NA non-coding upstream 116580 10777319 ~ 10779976 (-)
G223688 NA non-coding upstream 166669 10827408 ~ 10829310 (-)
G223702 NA non-coding upstream 187669 10848408 ~ 10848704 (-)
G223703 NA non-coding upstream 188207 10848946 ~ 10849353 (-)
LOC110508724 prpf31 other downstream 637105 10019313 ~ 10024005 (-)
G223070 NA other downstream 645416 10012961 ~ 10014892 (-)
LOC110508696 ndufa3 other downstream 657414 10001415 ~ 10002941 (-)
LOC110534283 LOC106573819 other downstream 976937 9679758 ~ 9689081 (-)
LOC118944443 LOC106573533 other downstream 986869 9665862 ~ 9673439 (-)
znf628 LOC106605829 other upstream 410207 11068525 ~ 11079570 (-)
G223942 LOC106576860 other upstream 511381 11172120 ~ 11174367 (-)
G223969 LOC106605840 other upstream 615178 11275917 ~ 11278628 (-)
LOC110509576 LOC106576947 other upstream 1066623 11727284 ~ 11741584 (-)
G224869 NA other upstream 1092112 11752851 ~ 11753680 (-)

Expression



Co-expression Network