G223444



Basic Information


Item Value
gene id G223444
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10903179 ~ 10903526 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU255361
aaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgttcacaaatgctctccatccaacctcactgaactcgagctgttttgcaaggaggaatgggaaaaaatttcagtctctcgatgtgcagaactgatagagacataccccaagcgacttacagctgtaatcgcagcaaaaggtggcgctacaaagtattaacttaagggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU255361 True 348 lncRNA 0.40 1 10903179 10903526

Neighbor


gene id symbol gene type direction distance location
LOC110508993 LOC106576906 coding upstream 24544 10876757 ~ 10878635 (+)
cacng8b LOC106576929 coding upstream 76058 10769638 ~ 10827279 (+)
LOC110520833 LOC106575226 coding upstream 150362 10716613 ~ 10767669 (+)
prkcg LOC105019084 coding upstream 201451 10661090 ~ 10701728 (+)
LOC110520829 LOC102782376 coding upstream 298123 10431758 ~ 10605056 (+)
LOC110509020 LOC106605819 coding downstream 9555 10913081 ~ 10925718 (+)
isoc2 isoc2 coding downstream 38255 10941781 ~ 10944125 (+)
foxj2 LOC106605824 coding downstream 42099 10945625 ~ 10947532 (+)
LOC110537149 LOC106591073 coding downstream 79294 10982780 ~ 10995885 (+)
mfap5 LOC106575133 coding downstream 132712 11036238 ~ 11041281 (+)
G223441 NA non-coding upstream 2271 10900596 ~ 10900908 (+)
G223424 NA non-coding upstream 30995 10868327 ~ 10872184 (+)
G223421 NA non-coding upstream 45302 10857553 ~ 10857877 (+)
G223414 NA non-coding upstream 55294 10847645 ~ 10847885 (+)
G223381 NA non-coding upstream 73863 10827389 ~ 10829316 (+)
G223449 NA non-coding downstream 5926 10909452 ~ 10909682 (+)
G223433 NA non-coding downstream 45417 10948943 ~ 10950025 (+)
G223752 NA non-coding downstream 85549 10989075 ~ 10989274 (+)
G223757 NA non-coding downstream 98604 11002130 ~ 11002335 (+)
G223418 u2af2 other upstream 46979 10853702 ~ 10856200 (+)
LOC110508886 LOC106605776 other upstream 590927 10306848 ~ 10314535 (+)
G223434 LOC106595748 other downstream 46623 10950149 ~ 10952739 (+)
G223748 NA other downstream 138322 11041848 ~ 11043692 (+)
LOC110509074 LOC106576860 other downstream 263483 11166919 ~ 11174363 (+)

Expression



Co-expression Network