G223711



Basic Information


Item Value
gene id G223711
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10911271 ~ 10911708 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU255683
gtgttaaacaaatcaaaatatatcttagattctagattcttcaaagtagccacgctttgcattctctcaaccagcttcacctgaaatgcttttccaacagtattgaaggagttcccacatatgctgagcacttgttggccgcttttccttcactctgtagtCCAATTCAtcgcaaaccatctcaattgggttgaggtcgggtgattgtggaggccaggtcatctgatgtagcactccatgactctccttcttggttaaatagcctttacacagcctggaggtgtgttgggtcactatcctgttgaaaaacaaatgatagtcccactaagcgcaaaccagatgtgatggcgtatcgctgcagaatgctgtggtagccatgctggttaagtgtgccttgaattctaaataaatcacagacagtgtcaccagcaaagcacc

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU255683 True 438 lncRNA 0.44 1 10911271 10911708

Neighbor


gene id symbol gene type direction distance location
LOC110508973 LOC106576890 coding downstream 15359 10878709 ~ 10895912 (-)
LOC110508957 LOC106576897 coding downstream 35142 10865535 ~ 10876129 (-)
LOC110508966 u2af2 coding downstream 46009 10853702 ~ 10865262 (-)
LOC110508947 LOC106576934 coding downstream 64029 10831566 ~ 10847242 (-)
pitpnc1b LOC106593696 coding downstream 498199 10396551 ~ 10413072 (-)
si:ch211-149k23.9 LOC106591404 coding upstream 16287 10927995 ~ 10936251 (-)
LOC110537203 LOC106576885 coding upstream 25734 10937442 ~ 10941795 (-)
epn1 LOC106605818 coding upstream 38425 10950133 ~ 10968515 (-)
LOC110509040 necp1 coding upstream 131259 11042967 ~ 11051742 (-)
LOC110520834 LOC106575151 coding upstream 140159 11051867 ~ 11054170 (-)
G223710 NA non-coding downstream 775 10910236 ~ 10910496 (-)
G223707 NA non-coding downstream 8476 10902561 ~ 10902795 (-)
G223703 NA non-coding downstream 61918 10848946 ~ 10849353 (-)
G223702 NA non-coding downstream 62567 10848408 ~ 10848704 (-)
G223688 NA non-coding downstream 81961 10827408 ~ 10829310 (-)
G223717 NA non-coding upstream 6981 10918689 ~ 10920990 (-)
G223723 NA non-coding upstream 32811 10944519 ~ 10944813 (-)
G223734 NA non-coding upstream 62511 10974219 ~ 10974422 (-)
G223881 NA non-coding upstream 71199 10982907 ~ 10983190 (-)
G223886 LOC106591073 non-coding upstream 82967 10994675 ~ 10995433 (-)
LOC110508724 prpf31 other downstream 888068 10019313 ~ 10024005 (-)
G223070 NA other downstream 896379 10012961 ~ 10014892 (-)
LOC110508696 ndufa3 other downstream 908377 10001415 ~ 10002941 (-)
LOC110534283 LOC106573819 other downstream 1227900 9679758 ~ 9689081 (-)
LOC118944443 LOC106573533 other downstream 1237832 9665862 ~ 9673439 (-)
znf628 LOC106605829 other upstream 159238 11068525 ~ 11079570 (-)
G223942 LOC106576860 other upstream 260412 11172120 ~ 11174367 (-)
G223969 LOC106605840 other upstream 364209 11275917 ~ 11278628 (-)
LOC110509576 LOC106576947 other upstream 815654 11727284 ~ 11741584 (-)
G224869 NA other upstream 841143 11752851 ~ 11753680 (-)

Expression



Co-expression Network