G223434 (LOC106595748)


Basic Information

Item Value
gene id G223434
gene name LOC106595748
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 10950149 ~ 10952739 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU255351
atttctttttttaaattttacttCTCAAATGTGAATGTTCACAGTTAACACCACACAAAATGTGACCTTACCCAATAAAAGAGATCTTTTAGTTGATATAAAATAACAATCAATTCATCAAACTAAATGAAAAGAAACAGCATGGAGCATGTCATCAAGTTCCCTGTTGTTTAAGTTCGTTCATTCATTGAATTGTCTTTTTAAAAGAAGCATCTGTAGCTCTCCCCCCGTAGGAGCGAGGGTCAGAAAGGAGAGGGTCCAGTCATGTTGAGACACCTGGAGACGAGACACCTGGAGACGAGACATCCTGTATGAAAGAGTGAGAAAGACTAATGCTTCTGATTAATACAAAACATTTGTGAAATAAAATTGGCAGAAAAATGTGATCCTTATAATACCTCATTTGAAATCCCAACATTACATAGCATTGATACAAGTGACAatttttaaaaacaaaaataatagATTTGTATCTTGCTGAAATAAGCGAGGACGCAGGATGaatggagacagacacacacacacactcttccacaCAACACATTTACAAAACACATTCCAGCTCTCCTCAACCAAGTCAATAGATGCCCTCTTGATTTCCATGACAAGAAAAAATAAGCATTTGATTTAATGGCATAATTGCGTAATTTTCCCTCCTTGTTTATTCATTCCCAGGAGCggaaaaaaattgaaataaatgacATGAATTAAAAAATAGAACAGCTATTGAATGATTTGACTATATTGTGGCTGAAATGTTAATGCCAGCTTTTTCAGTCCAAATCTTGTTCAggagttgttttttttaatcaaatccTCCTTCAATCCTCCTCTTTTCAGACAAAGAAAGGAAGAGGCAAGTACAGGAATTTGTTTGTGTTTCAGTTTGTTAGTGGCCatgtcccatctctctccccatctctgtcaGTGCAATAATGCAATATTATATCAGTGTGACATAACTGATGAAGCCTAACTCTCAAACACCCACCTTTATTTCAGAAAGGACTGAAAGAGAGCAAAACGcattaaaacaaaataaaaataaataaacgtcTATTTCCCTCCCGCTACATCCCACTGAAATGAAAGGAACCAAAATATTTGTTGTTGGAATTCATCTGAGCTAGgagaaaaatacATGTAAATTCATCTGAGCTAGGAGAAAAATACATGGAAATTCATCTGAGCTAGgagaaaaatacatgtaaattcATCTGAGCTAGGAGAAAAATACATGTATATTCATCTGAGCTAGGAGAAAAATACATGGAAATTCATCTGAGCTAGGAGATAAATACATGTAAATTCATCTGAGCTAGGAGAAAAATACATGGAAATGCTTCTGAAAGAAAATAACAAATTCAGATTTTCTTTAAATATAGAGATGTACACACGTTTCTTATTGGAAACATAAATTGTTTGTGTTGAAGGAGGATCGCTCTGGGGGGGAAAGGGGGGGCAGTAGATGAGCCAGGGGGTGGGGCAGGGCCTGGATTGGGTGTTGAAGAGGAACGGGGAGTGCCGAAACGCCCTCAAAGAAGAAAGGGATTGGTGCTGGCGCCCGTCACTCCGGCCCCTCCCACTGCTCCCCCGGCTCCCATCACTCCAGCTGCCCCCGTAGGCCCCCCAAAATTCAGCTGTGGGGGCAGGGTCCCTCCGGGCCCCATGAAGTGAGAGGACCCAGGAGGACCCATGGGCGAGAGCCCGCCGTAGGGGGACATTCCCATGGGGCTCTGCATCATACCCATCCCCAGGCCTGGTGCTCCCATACCCATAGGCCCCAAGCCCATGCCAGGGTATGCCATGGGGTTGGGTGGTACAGGGCTGGTGCGGAGGCTGCTGAGGCCCAGTGTGGAGGGCTGTGGGGAGATGGAGGACATGGGGGCGGCCGCTCCAAACGGGTTGGAGGTGGGGGGTGGCGTCGGGGAAACCCCCCTGCTGGAGATTGTGCTGCCCGGGGTGACTGCCATGCCAGGGGCT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255351 True 1983 TUCP 0.44 2 10950149 10952739

Neighbor

gene id symbol gene type direction distance location
foxj2 LOC106605824 coding upstream 2617 10945625 ~ 10947532 (+)
isoc2 isoc2 coding upstream 6024 10941781 ~ 10944125 (+)
LOC110509020 LOC106605819 coding upstream 24431 10913081 ~ 10925718 (+)
LOC110508993 LOC106576906 coding upstream 71514 10876757 ~ 10878635 (+)
cacng8b LOC106576929 coding upstream 123028 10769638 ~ 10827279 (+)
LOC110537149 LOC106591073 coding downstream 30081 10982780 ~ 10995885 (+)
mfap5 LOC106575133 coding downstream 83499 11036238 ~ 11041281 (+)
LOC110509074 LOC106576860 coding downstream 214180 11166919 ~ 11174363 (+)
LOC110509082 gtr3 coding downstream 236219 11188958 ~ 11216832 (+)
ephb6 LOC106576842 coding downstream 280170 11232909 ~ 11308010 (+)
G223433 NA non-coding upstream 124 10948943 ~ 10950025 (+)
G223449 NA non-coding upstream 40467 10909452 ~ 10909682 (+)
G223444 NA non-coding upstream 46623 10903179 ~ 10903526 (+)
G223441 NA non-coding upstream 49241 10900596 ~ 10900908 (+)
G223424 NA non-coding upstream 77965 10868327 ~ 10872184 (+)
G223752 NA non-coding downstream 36336 10989075 ~ 10989274 (+)
G223757 NA non-coding downstream 49391 11002130 ~ 11002335 (+)
G223775 LOC106605829 non-coding downstream 119879 11072618 ~ 11077866 (+)
G223788 NA non-coding downstream 148051 11100790 ~ 11123987 (+)
G223418 u2af2 other upstream 93949 10853702 ~ 10856200 (+)
LOC110520833 LOC106575226 other upstream 182480 10716613 ~ 10767669 (+)
LOC110508886 LOC106605776 other upstream 637897 10306848 ~ 10314535 (+)
G223748 NA other downstream 89109 11041848 ~ 11043692 (+)
G224035 NA other downstream 438594 11391333 ~ 11391962 (+)

Expression


Co-expression Network