Gene
RNA
| Item | Value |
|---|---|
| gene id | G223898 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 11038462 ~ 11039737 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU255935 | False | 264 | lncRNA | 0.55 | 3 | 11038462 | 11039737 |
| TU255936 | True | 384 | lncRNA | 0.55 | 2 | 11038746 | 11039229 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| epn1 | LOC106605818 | coding | downstream | 69947 | 10950133 ~ 10968515 (-) |
| LOC110537203 | LOC106576885 | coding | downstream | 96667 | 10937442 ~ 10941795 (-) |
| si:ch211-149k23.9 | LOC106591404 | coding | downstream | 102211 | 10927995 ~ 10936251 (-) |
| LOC110508973 | LOC106576890 | coding | downstream | 142550 | 10878709 ~ 10895912 (-) |
| LOC110508957 | LOC106576897 | coding | downstream | 162333 | 10865535 ~ 10876129 (-) |
| LOC110509040 | necp1 | coding | upstream | 3230 | 11042967 ~ 11051742 (-) |
| LOC110520834 | LOC106575151 | coding | upstream | 12130 | 11051867 ~ 11054170 (-) |
| LOC110520907 | nat14 | coding | upstream | 25752 | 11061915 ~ 11066973 (-) |
| znf628 | LOC106605829 | coding | upstream | 28788 | 11068525 ~ 11079570 (-) |
| LOC110509048 | il-11 | coding | upstream | 40238 | 11079975 ~ 11087129 (-) |
| G223886 | LOC106591073 | non-coding | downstream | 43029 | 10994675 ~ 10995433 (-) |
| G223881 | NA | non-coding | downstream | 55272 | 10982907 ~ 10983190 (-) |
| G223734 | NA | non-coding | downstream | 64040 | 10974219 ~ 10974422 (-) |
| G223723 | NA | non-coding | downstream | 93649 | 10944519 ~ 10944813 (-) |
| G223717 | NA | non-coding | downstream | 117472 | 10918689 ~ 10920990 (-) |
| G223919 | NA | non-coding | upstream | 49609 | 11089346 ~ 11089558 (-) |
| G223924 | NA | non-coding | upstream | 64353 | 11104090 ~ 11108240 (-) |
| G223950 | NA | non-coding | upstream | 138718 | 11178455 ~ 11179883 (-) |
| LOC110508724 | prpf31 | other | downstream | 1015259 | 10019313 ~ 10024005 (-) |
| G223070 | NA | other | downstream | 1023570 | 10012961 ~ 10014892 (-) |
| LOC110508696 | ndufa3 | other | downstream | 1035568 | 10001415 ~ 10002941 (-) |
| LOC110534283 | LOC106573819 | other | downstream | 1355091 | 9679758 ~ 9689081 (-) |
| LOC118944443 | LOC106573533 | other | downstream | 1365023 | 9665862 ~ 9673439 (-) |
| G223942 | LOC106576860 | other | upstream | 132383 | 11172120 ~ 11174367 (-) |
| G223969 | LOC106605840 | other | upstream | 236180 | 11275917 ~ 11278628 (-) |
| LOC110509576 | LOC106576947 | other | upstream | 687625 | 11727284 ~ 11741584 (-) |
| G224869 | NA | other | upstream | 713114 | 11752851 ~ 11753680 (-) |
