G223748


Basic Information

Item Value
gene id G223748
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11041848 ~ 11043692 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU255730
ctctatccatccatccctccatccatccctctatccatccctccatccatccatccctctatccatccatccctccctccatccatccatccatccatccctttttCTCTCAATAACAACACAACAGTAAAGTAAAACACTGCATCTCACAAGGACTGGAATAGTCTGACTGCATTGACAGAGTTACGTTAGTTCCAGGGTTCAACGTATAGaatacagacagacggacggacagacagacagttgtatgtacacacacagggCTATTCATCCAGCAGGGCAAAAGTCGTGACCTAAATTAGTCATCTCTACCCAGAAACCCCTAGGGACTGTTTACATCACAAGGCCTAAATTATTACCTCACAAGGCCTTAATCAGGCCTGTCTATCACCCCATGGGTTTAAGCCCTTcctcaccctccatccctcctcagaACCCACTCATCTTTCCCCTTCATCccctcactctgctgtcccttcCCTCAATTAGCAAACTTttttcctctcactccctccatttCTGTGTTAACTAACACCAGCCTCCTGTTAAAACAATGCAGCCAAGTGATCCAGACAAGTGCCCATCCCCAGCCAGCAGTGATAATGTCCACAGCAGCTGCTGTTGTGCATCTCACCACTCTCCCCGTCAGACTGTGGTTGTAGGACCGCAATAGCCCACTAAGGGGCGCCAAACAGCATGCCTGCTGTGTAAACTTACAGTAGATCAGTGTCCACTCAAAGCAGAAGCTGCTCCAAAGCACAGCTCCAGACTCACCGTGGCCTGACCTTAGCAATTAAGAGGAAAACGCAAATCTGACCTTAGATCAGATATGAGATAACTTGGTCATATACTAATGCATCCAGGCAAGCCTGTAAATCAGTTATTTCAGGCGATAATTCCAGTTGGAGATTCTAAAGGAAAATTAGctacaacactaccacaacaaccaTGGGAATTACAAACTACTgacaatatatacatttacaataaTATATTATGTACATAAATTaactaatgtatttatttatcaagACTATATTAGTGTGAGTCACCATCATTCCTTTCTGTACCATCTTTCATTTAAAGAGATTTGCCCTCAGTCTTTTCCCTCAGTAATAAATAAATACTCTGTTgcaatagatagagagacagagggagagaagggcaaggagaggagatggggggagagagtgtAACTTTGGGGCTGAGAGGGAAagatgtagagggagaggatggtaaggagaggagacggggggagagaagggcaaggagaggagacggggggagagaagggcaaggagaggagatggggggagagagtgtAACTTTGGGGCTGAGAGGGAAagatgtagagggagaggatggtaaggagaggagacggggggagagaagggcaaggagaggagacggggggagagaagggcaaggagaggagacggggggagagagtaaCTTTGGGGCTGAGAGGGAAagatgtagagggagaggatggtAAGGAGAGGAAGccaggagaggggtgaagagagagagataaataaagagagggggaagagagagaaagagtacacTGAGGTTGAGGTGATAATATACAGTGTTCTGCTGGAGTCCTCCTCTGgtcaggggttaaaggtcaggtgAAGGTCAAGTGAAAGAGATTGTGCGACGACCTCAGAACTGCTGCCAGTTGGTGGAACCATCATCGTTGGTGAGAGAAGACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU255730 True 1718 TUCP 0.47 3 11041848 11043692

Neighbor

gene id symbol gene type direction distance location
mfap5 LOC106575133 coding upstream 567 11036238 ~ 11041281 (+)
LOC110537149 LOC106591073 coding upstream 45963 10982780 ~ 10995885 (+)
foxj2 LOC106605824 coding upstream 94316 10945625 ~ 10947532 (+)
isoc2 isoc2 coding upstream 97723 10941781 ~ 10944125 (+)
LOC110509020 LOC106605819 coding upstream 116130 10913081 ~ 10925718 (+)
LOC110509074 LOC106576860 coding downstream 123227 11166919 ~ 11174363 (+)
LOC110509082 gtr3 coding downstream 145266 11188958 ~ 11216832 (+)
ephb6 LOC106576842 coding downstream 189217 11232909 ~ 11308010 (+)
LOC110509096 NA coding downstream 217501 11261193 ~ 11268540 (+)
LOC118945782 LOC106605840 coding downstream 231488 11275180 ~ 11278634 (+)
G223757 NA non-coding upstream 39513 11002130 ~ 11002335 (+)
G223752 NA non-coding upstream 52574 10989075 ~ 10989274 (+)
G223433 NA non-coding upstream 91823 10948943 ~ 10950025 (+)
G223449 NA non-coding upstream 132166 10909452 ~ 10909682 (+)
G223775 LOC106605829 non-coding downstream 28926 11072618 ~ 11077866 (+)
G223788 NA non-coding downstream 57098 11100790 ~ 11123987 (+)
G223815 NA non-coding downstream 154733 11198425 ~ 11202897 (+)
G224027 NA non-coding downstream 303010 11346702 ~ 11353026 (+)
G223434 LOC106595748 other upstream 89109 10950149 ~ 10952739 (+)
LOC110508993 LOC106576906 other upstream 163314 10876757 ~ 10878635 (+)
G223418 u2af2 other upstream 185648 10853702 ~ 10856200 (+)
G224035 NA other downstream 347641 11391333 ~ 11391962 (+)
G224052 gstk1 other downstream 389428 11433120 ~ 11436460 (+)
LOC110520911 zyx other downstream 537090 11580308 ~ 11600483 (+)
mrpl51 LOC100194563 other downstream 744837 11788492 ~ 11790660 (+)

Expression


Co-expression Network