Item | Value |
---|---|
gene id | G224016 |
gene name | NA |
gene type | non-coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048567.1 |
NCBI id | CM023221.2 |
chromosome length | 85311031 |
location | 11365425 ~ 11368219 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
TU256099 | False | 471 | lncRNA | 0.37 | 2 | 11365425 | 11365941 |
TU256100 | True | 546 | lncRNA | 0.35 | 3 | 11365425 | 11368219 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110520909 | LOC106576839 | coding | upstream | 18907 | 11340306 ~ 11346518 (+) |
trpv6 | LOC106605837 | coding | upstream | 26807 | 11324050 ~ 11338618 (+) |
ephb6 | LOC106576842 | coding | upstream | 57415 | 11232909 ~ 11308010 (+) |
m6pr | mprd | coding | downstream | 30801 | 11399020 ~ 11406578 (+) |
LOC110509154 | LOC106576792 | coding | downstream | 43169 | 11411388 ~ 11420807 (+) |
LOC110509281 | LOC106576719 | coding | downstream | 100555 | 11468774 ~ 11476776 (+) |
LOC118944450 | LOC106605830 | coding | downstream | 111578 | 11479797 ~ 11489832 (+) |
LOC118944486 | LOC106592935 | coding | downstream | 128087 | 11496306 ~ 11501325 (+) |
G224017 | c209e | non-coding | upstream | 1768 | 11359022 ~ 11363657 (+) |
G224027 | NA | non-coding | upstream | 12399 | 11346702 ~ 11353026 (+) |
LOC118945782 | LOC106605840 | non-coding | upstream | 86795 | 11275180 ~ 11278634 (+) |
G223815 | NA | non-coding | upstream | 162528 | 11198425 ~ 11202897 (+) |
G223788 | NA | non-coding | upstream | 241438 | 11100790 ~ 11123987 (+) |
G224033 | NA | non-coding | downstream | 20687 | 11388906 ~ 11389145 (+) |
G224034 | NA | non-coding | downstream | 21438 | 11389657 ~ 11389896 (+) |
G224037 | NA | non-coding | downstream | 29655 | 11397874 ~ 11398304 (+) |
G224051 | NA | non-coding | downstream | 64008 | 11432227 ~ 11432808 (+) |
G224055 | NA | non-coding | downstream | 79362 | 11447581 ~ 11447936 (+) |
LOC110509074 | LOC106576860 | other | upstream | 191062 | 11166919 ~ 11174363 (+) |
G223748 | NA | other | upstream | 321733 | 11041848 ~ 11043692 (+) |
mfap5 | LOC106575133 | other | upstream | 324165 | 11036238 ~ 11041281 (+) |
LOC110537149 | LOC106591073 | other | upstream | 370010 | 10982780 ~ 10995885 (+) |
G223434 | LOC106595748 | other | upstream | 412686 | 10950149 ~ 10952739 (+) |
G224035 | NA | other | downstream | 23114 | 11391333 ~ 11391962 (+) |
G224052 | gstk1 | other | downstream | 64901 | 11433120 ~ 11436460 (+) |
LOC110520911 | zyx | other | downstream | 212563 | 11580308 ~ 11600483 (+) |
mrpl51 | LOC100194563 | other | downstream | 420310 | 11788492 ~ 11790660 (+) |
LOC110537447 | LOC106577011 | other | downstream | 646289 | 12005269 ~ 12053650 (+) |