G224054


Basic Information

Item Value
gene id G224054
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11448114 ~ 11448478 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU256148
tatgagatgcaaaattgagctcaagtgcatcctgtttccattgatcatctttaagatgttttttacaacttgattggagtccacctgtggtaaattcaattgattggacatgatttggaaagacacctgtctgtctatataaggtcccacagttgacagtgcatgtcagagcaaaaaccaagccatgaggtcgaaagggatagtccgtagagctccgagacaggattgggtcgagggacagatctggggaaggatactaaaacatttctgcagcattgaaggtccaccaagaacacagtgacctccatctttctgaaatggaagaagtttggaagcaacaagactcttccaagagctggctgcct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256148 True 365 lncRNA 0.37 1 11448114 11448478

Neighbor

gene id symbol gene type direction distance location
LOC110509154 LOC106576792 coding upstream 27307 11411388 ~ 11420807 (+)
m6pr mprd coding upstream 41536 11399020 ~ 11406578 (+)
LOC110520909 LOC106576839 coding upstream 101596 11340306 ~ 11346518 (+)
trpv6 LOC106605837 coding upstream 109496 11324050 ~ 11338618 (+)
LOC118945782 LOC106605840 coding upstream 169480 11275180 ~ 11278634 (+)
LOC110509281 LOC106576719 coding downstream 20296 11468774 ~ 11476776 (+)
LOC118944450 LOC106605830 coding downstream 31319 11479797 ~ 11489832 (+)
LOC118944486 LOC106592935 coding downstream 47828 11496306 ~ 11501325 (+)
LOC110520911 zyx coding downstream 131830 11580308 ~ 11600483 (+)
kel LOC106575861 coding downstream 153905 11602383 ~ 11608965 (+)
G224055 NA non-coding upstream 178 11447581 ~ 11447936 (+)
G224051 NA non-coding upstream 15306 11432227 ~ 11432808 (+)
G224037 NA non-coding upstream 49810 11397874 ~ 11398304 (+)
G224034 NA non-coding upstream 58218 11389657 ~ 11389896 (+)
G224033 NA non-coding upstream 58969 11388906 ~ 11389145 (+)
G224056 NA non-coding downstream 1415 11449893 ~ 11450122 (+)
G224057 NA non-coding downstream 1792 11450270 ~ 11450539 (+)
G224062 NA non-coding downstream 6522 11455000 ~ 11455225 (+)
G224071 NA non-coding downstream 15571 11464049 ~ 11464653 (+)
G224081 NA non-coding downstream 44100 11492578 ~ 11493341 (+)
G224052 gstk1 other upstream 11654 11433120 ~ 11436460 (+)
G224035 NA other upstream 56152 11391333 ~ 11391962 (+)
LOC110509074 LOC106576860 other upstream 273751 11166919 ~ 11174363 (+)
G223748 NA other upstream 404422 11041848 ~ 11043692 (+)
mfap5 LOC106575133 other upstream 406854 11036238 ~ 11041281 (+)
mrpl51 LOC100194563 other downstream 340051 11788492 ~ 11790660 (+)
LOC110537447 LOC106577011 other downstream 566030 12005269 ~ 12053650 (+)
G224297 NA other downstream 572487 12020965 ~ 12022444 (+)
LOC110509826 LOC106576393 other downstream 810843 12259134 ~ 12357204 (+)

Expression


Co-expression Network