G224071


Basic Information

Item Value
gene id G224071
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11464049 ~ 11464653 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU256172
TTTccaggggcctgttgcacaaaagtagaattaagacatccgggataaatgactcagctgagctcaatgaagccaaaacatgtgcgtccaggcttaattggttgcacaaagaccaagccaggatgagcagacacggattcattaagccaggtgaaaccaatcctggataggtgcgcgctcacggctcactcaaatagaccccgccacagatcacagattaactgatttaccatggcaactagagccgcgtacttttccccgtcggaagcacaaatcctcatggaggcatacgaggaggtaaaagatataattaagaagaaaggcaacaccgccacagtgataaagcaaagagaaaaagcgtggcaaagtattgcagaccgcctgaatgcgtaagtagtgcacaattacacactcaccgctccgctgaaacatcacaattacaattcaaatatttaattcacatctccaaaaatgcagttgtactgtaattatgaaacggttaaatttttttattgaaatgcactgcagatatgagtgaaattgtgtaaagtaactccatcacactgtataaagctatgataaaatttttgatatttttactgaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC109103436

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256172 True 605 lncRNA 0.41 1 11464049 11464653

Neighbor

gene id symbol gene type direction distance location
LOC110509154 LOC106576792 coding upstream 43242 11411388 ~ 11420807 (+)
m6pr mprd coding upstream 57471 11399020 ~ 11406578 (+)
LOC110520909 LOC106576839 coding upstream 117531 11340306 ~ 11346518 (+)
trpv6 LOC106605837 coding upstream 125431 11324050 ~ 11338618 (+)
LOC118945782 LOC106605840 coding upstream 185415 11275180 ~ 11278634 (+)
LOC110509281 LOC106576719 coding downstream 4121 11468774 ~ 11476776 (+)
LOC118944450 LOC106605830 coding downstream 15144 11479797 ~ 11489832 (+)
LOC118944486 LOC106592935 coding downstream 31653 11496306 ~ 11501325 (+)
LOC110520911 zyx coding downstream 115655 11580308 ~ 11600483 (+)
kel LOC106575861 coding downstream 137730 11602383 ~ 11608965 (+)
G224062 NA non-coding upstream 8824 11455000 ~ 11455225 (+)
G224057 NA non-coding upstream 13510 11450270 ~ 11450539 (+)
G224056 NA non-coding upstream 13927 11449893 ~ 11450122 (+)
G224054 NA non-coding upstream 15571 11448114 ~ 11448478 (+)
G224055 NA non-coding upstream 16113 11447581 ~ 11447936 (+)
G224081 NA non-coding downstream 27925 11492578 ~ 11493341 (+)
G224097 NA non-coding downstream 65836 11530489 ~ 11531732 (+)
G224099 NA non-coding downstream 76215 11540868 ~ 11541486 (+)
G224105 NA non-coding downstream 87631 11552284 ~ 11552590 (+)
G224126 NA non-coding downstream 97106 11561759 ~ 11561981 (+)
G224052 gstk1 other upstream 27589 11433120 ~ 11436460 (+)
G224035 NA other upstream 72087 11391333 ~ 11391962 (+)
LOC110509074 LOC106576860 other upstream 289686 11166919 ~ 11174363 (+)
G223748 NA other upstream 420357 11041848 ~ 11043692 (+)
mfap5 LOC106575133 other upstream 422789 11036238 ~ 11041281 (+)
mrpl51 LOC100194563 other downstream 323876 11788492 ~ 11790660 (+)
LOC110537447 LOC106577011 other downstream 549855 12005269 ~ 12053650 (+)
G224297 NA other downstream 556312 12020965 ~ 12022444 (+)
LOC110509826 LOC106576393 other downstream 794668 12259134 ~ 12357204 (+)

Expression


Co-expression Network