Gene
RNA
| Item | Value |
|---|---|
| gene id | G224099 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 11540868 ~ 11541486 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: polypyrimidine tract-binding protein 3-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU256208 | True | 278 | lncRNA | 0.43 | 2 | 11540868 | 11541486 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118944486 | LOC106592935 | coding | upstream | 39543 | 11496306 ~ 11501325 (+) |
| LOC118944450 | LOC106605830 | coding | upstream | 51036 | 11479797 ~ 11489832 (+) |
| LOC110509281 | LOC106576719 | coding | upstream | 64092 | 11468774 ~ 11476776 (+) |
| LOC110509154 | LOC106576792 | coding | upstream | 120061 | 11411388 ~ 11420807 (+) |
| m6pr | mprd | coding | upstream | 134290 | 11399020 ~ 11406578 (+) |
| LOC110520911 | zyx | coding | downstream | 38822 | 11580308 ~ 11600483 (+) |
| kel | LOC106575861 | coding | downstream | 60897 | 11602383 ~ 11608965 (+) |
| LOC110509324 | LOC106575899 | coding | downstream | 69093 | 11610579 ~ 11613064 (+) |
| LOC110509359 | LOC106576663 | coding | downstream | 82479 | 11623965 ~ 11630699 (+) |
| LOC110509378 | LOC106605735 | coding | downstream | 89357 | 11630843 ~ 11635397 (+) |
| G224097 | NA | non-coding | upstream | 9136 | 11530489 ~ 11531732 (+) |
| G224081 | NA | non-coding | upstream | 47527 | 11492578 ~ 11493341 (+) |
| G224071 | NA | non-coding | upstream | 76215 | 11464049 ~ 11464653 (+) |
| G224062 | NA | non-coding | upstream | 85643 | 11455000 ~ 11455225 (+) |
| G224057 | NA | non-coding | upstream | 90329 | 11450270 ~ 11450539 (+) |
| G224105 | NA | non-coding | downstream | 10798 | 11552284 ~ 11552590 (+) |
| G224126 | NA | non-coding | downstream | 20273 | 11561759 ~ 11561981 (+) |
| G224134 | NA | non-coding | downstream | 34665 | 11576151 ~ 11576458 (+) |
| G224116 | LOC106575912 | non-coding | downstream | 72080 | 11613566 ~ 11615975 (+) |
| G224138 | NA | non-coding | downstream | 77201 | 11618687 ~ 11619112 (+) |
| G224052 | gstk1 | other | upstream | 104408 | 11433120 ~ 11436460 (+) |
| G224035 | NA | other | upstream | 148906 | 11391333 ~ 11391962 (+) |
| LOC110509074 | LOC106576860 | other | upstream | 366505 | 11166919 ~ 11174363 (+) |
| G223748 | NA | other | upstream | 497176 | 11041848 ~ 11043692 (+) |
| mfap5 | LOC106575133 | other | upstream | 499608 | 11036238 ~ 11041281 (+) |
| mrpl51 | LOC100194563 | other | downstream | 247043 | 11788492 ~ 11790660 (+) |
| LOC110537447 | LOC106577011 | other | downstream | 473022 | 12005269 ~ 12053650 (+) |
| G224297 | NA | other | downstream | 479479 | 12020965 ~ 12022444 (+) |
| LOC110509826 | LOC106576393 | other | downstream | 717835 | 12259134 ~ 12357204 (+) |
