G224105


Basic Information

Item Value
gene id G224105
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11552284 ~ 11552590 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU256214
atactaattgagtgtatgtaaacttctgaccaactgggaatgtgattaaaaaaaatacaagctgaaataaatcggtattattctgacatttcacattctcaaaataaagtggtgatcctaactgacttaagacagggaatttttactaggattaaatgtcaggaattgtgaaaagctgagtttaaatgtatttggctaagttgtatgtaaacttctgacttcaactgtatgttaacattgccaaagcaagtgaagtagataataaactaaagtgaaataaacaatacaaatgaacagtaacagtaac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256214 True 307 lncRNA 0.38 1 11552284 11552590

Neighbor

gene id symbol gene type direction distance location
LOC118944486 LOC106592935 coding upstream 50959 11496306 ~ 11501325 (+)
LOC118944450 LOC106605830 coding upstream 62452 11479797 ~ 11489832 (+)
LOC110509281 LOC106576719 coding upstream 75508 11468774 ~ 11476776 (+)
LOC110509154 LOC106576792 coding upstream 131477 11411388 ~ 11420807 (+)
m6pr mprd coding upstream 145706 11399020 ~ 11406578 (+)
LOC110520911 zyx coding downstream 27718 11580308 ~ 11600483 (+)
kel LOC106575861 coding downstream 49793 11602383 ~ 11608965 (+)
LOC110509324 LOC106575899 coding downstream 57989 11610579 ~ 11613064 (+)
LOC110509359 LOC106576663 coding downstream 71375 11623965 ~ 11630699 (+)
LOC110509378 LOC106605735 coding downstream 78253 11630843 ~ 11635397 (+)
G224099 NA non-coding upstream 10798 11540868 ~ 11541486 (+)
G224097 NA non-coding upstream 20552 11530489 ~ 11531732 (+)
G224081 NA non-coding upstream 58943 11492578 ~ 11493341 (+)
G224071 NA non-coding upstream 87631 11464049 ~ 11464653 (+)
G224062 NA non-coding upstream 97059 11455000 ~ 11455225 (+)
G224126 NA non-coding downstream 9169 11561759 ~ 11561981 (+)
G224134 NA non-coding downstream 23561 11576151 ~ 11576458 (+)
G224116 LOC106575912 non-coding downstream 60976 11613566 ~ 11615975 (+)
G224138 NA non-coding downstream 66097 11618687 ~ 11619112 (+)
G224163 NA non-coding downstream 141233 11693823 ~ 11694023 (+)
G224052 gstk1 other upstream 115824 11433120 ~ 11436460 (+)
G224035 NA other upstream 160322 11391333 ~ 11391962 (+)
LOC110509074 LOC106576860 other upstream 377921 11166919 ~ 11174363 (+)
G223748 NA other upstream 508592 11041848 ~ 11043692 (+)
mfap5 LOC106575133 other upstream 511024 11036238 ~ 11041281 (+)
mrpl51 LOC100194563 other downstream 235939 11788492 ~ 11790660 (+)
LOC110537447 LOC106577011 other downstream 461918 12005269 ~ 12053650 (+)
G224297 NA other downstream 468375 12020965 ~ 12022444 (+)
LOC110509826 LOC106576393 other downstream 706731 12259134 ~ 12357204 (+)

Expression


Co-expression Network