G224138


Basic Information

Item Value
gene id G224138
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11618687 ~ 11619112 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU256249
ggattgaggagggagaacagaattcatcctatttctttagacttgagaaatttcactctaaaaataacactatccataagttaaacattgatggtgttattacagatgaccAAAAATTAATCGCTAAATACTGCAGCAatttttacagaaaattgtatagctctacgaactgtcaggaatccacagatatgtttttttaactcactgaataatgttcactctatcagtgatatagaatctaaacagtgtgatgaacccatcaaagttgaagagattatagagtctatcaaacatctaaagaacaataaatcaccaggtgttgatggaattacatcagaattttacaaattattttctgaacaagaacccttcctatttgaagtctttttagagagtattaaaaacaatgttctccctcctacaacg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256249 True 426 lncRNA 0.32 1 11618687 11619112

Neighbor

gene id symbol gene type direction distance location
LOC110509324 LOC106575899 coding upstream 5623 11610579 ~ 11613064 (+)
kel LOC106575861 coding upstream 9722 11602383 ~ 11608965 (+)
LOC110520911 zyx coding upstream 18204 11580308 ~ 11600483 (+)
LOC118944486 LOC106592935 coding upstream 117362 11496306 ~ 11501325 (+)
LOC118944450 LOC106605830 coding upstream 128855 11479797 ~ 11489832 (+)
LOC110509359 LOC106576663 coding downstream 4853 11623965 ~ 11630699 (+)
LOC110509378 LOC106605735 coding downstream 11731 11630843 ~ 11635397 (+)
ncapd2 ncapd2 coding downstream 16565 11635677 ~ 11654262 (+)
LOC118964380 NA coding downstream 17854 11636966 ~ 11637264 (+)
LOC118964379 NA coding downstream 20004 11639116 ~ 11639420 (+)
G224116 LOC106575912 non-coding upstream 2712 11613566 ~ 11615975 (+)
G224134 NA non-coding upstream 42229 11576151 ~ 11576458 (+)
G224126 NA non-coding upstream 56706 11561759 ~ 11561981 (+)
G224105 NA non-coding upstream 66097 11552284 ~ 11552590 (+)
G224099 NA non-coding upstream 77201 11540868 ~ 11541486 (+)
G224163 NA non-coding downstream 74711 11693823 ~ 11694023 (+)
G224165 NA non-coding downstream 77382 11696494 ~ 11696725 (+)
G224167 NA non-coding downstream 81940 11701052 ~ 11701355 (+)
G224177 NA non-coding downstream 132602 11751714 ~ 11751899 (+)
G224182 NA non-coding downstream 142836 11761948 ~ 11765453 (+)
G224052 gstk1 other upstream 182227 11433120 ~ 11436460 (+)
G224035 NA other upstream 226725 11391333 ~ 11391962 (+)
LOC110509074 LOC106576860 other upstream 444324 11166919 ~ 11174363 (+)
G223748 NA other upstream 574995 11041848 ~ 11043692 (+)
mrpl51 LOC100194563 other downstream 169417 11788492 ~ 11790660 (+)
LOC110537447 LOC106577011 other downstream 395396 12005269 ~ 12053650 (+)
G224297 NA other downstream 401853 12020965 ~ 12022444 (+)
LOC110509826 LOC106576393 other downstream 640209 12259134 ~ 12357204 (+)
LOC110503596 LOC106576258 other downstream 749879 12368841 ~ 12430981 (+)

Expression


Co-expression Network