G224800


Basic Information

Item Value
gene id G224800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11646510 ~ 11659065 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257034
TTTGTCTTCTTCTCTTGTCTCCGATGCTGTGGGTCACTGTGTGCTCTCACAGGCTGGTTgcatctctttctctcagtctTTCCCTCTCTATCAGCTACCTCTCACTGTTTGGCACCTGCTGAAAGCATCACTATCTCACGCTTTgcccctccttttctcctcttccctctctctcactgatgTTATTGAAGGGATGAGTTATCCTCTTGTGTTCGCTTGGCAGAGGTTTAATGTTAGTGTATCAGCTGGGATGATGCCGTCGGTTTATACCGGCAAATATCCTCCCTCCggccccctccatctcccctcccctaCTTCATCACTGGGATGATGTCATGGCAGTAGGAGTGTTTGTCATCACCAAGGTGACTAGAGGTTGCCGGTGGCCACACATCTCCCCTGCTCGGAACACAATGATGTCACGGGAGGACACCCGCCAGGGTCAAAGGGCAAACAGAACATGACAAGAGCGCCCAACGGGTACAGTGGCTGGGGAGGACCAATTTTTGTAGCTGGACCTACAGTGGAGGTCGTCCTCCATCGGTCTGGTAACCCCACCACCCCATCAGTAGCTCAGTGCTGACGCTGCGCTCCAGGTGGGACACCTGCCAGAACGCCACGCAGCCACACAGAGACAGCAGCTGGGCCAGGGACACGCAGCTCACCGCAGGGACTAGAGGGACAGGAACACCGTACTGATCACGAAGTACCAATACAAAGGTCCTGAGATGCACCCGGCAACTGGCTGACATCCTTGTTTGCTAACATCTCCCCGCCCTCCGCAATCTGGTCCAATAGCAGACGAGAGCAGCGCTGGAGGAGGCGGGAGCAGAGCTGGTCTGGGGACTCGGACAGGAAGTACAGCAGACGGACAGCCTGCTCCATGAAGCTCTGCCAATGAGGGTCCGCCATC

Function

NR:

description
condensin complex subunit 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257034 True 913 lncRNA 0.56 3 11646510 11659065

Neighbor

gene id symbol gene type direction distance location
LOC110509335 NA coding downstream 31672 11613213 ~ 11614838 (-)
fam131bb fam131b coding downstream 97769 11503867 ~ 11548741 (-)
LOC110509245 LOC106576972 coding downstream 192144 11449258 ~ 11454366 (-)
LOC110509171 LOC100196661 coding downstream 209882 11433118 ~ 11436628 (-)
styk1b LOC106576787 coding downstream 213521 11424793 ~ 11432989 (-)
LOC110509576 LOC106576947 coding upstream 68219 11727284 ~ 11741584 (-)
LOC110509520 lag-3 coding upstream 116990 11776055 ~ 11779268 (-)
LOC110509592 LOC100136300 coding upstream 149048 11808113 ~ 11811663 (-)
c1r c1r/c1s coding upstream 160548 11819613 ~ 11825101 (-)
LOC110509614 ret1 coding upstream 199653 11858718 ~ 11862407 (-)
G224821 NA non-coding downstream 28216 11617251 ~ 11618294 (-)
G224822 NA non-coding downstream 29505 11616452 ~ 11617005 (-)
G224795 zyx non-coding downstream 57542 11580307 ~ 11588968 (-)
G224788 NA non-coding downstream 70985 11575163 ~ 11575525 (-)
G224783 NA non-coding downstream 76750 11569535 ~ 11569760 (-)
G224848 NA non-coding upstream 34415 11693480 ~ 11693715 (-)
G224850 NA non-coding upstream 36550 11695615 ~ 11695860 (-)
G224852 NA non-coding upstream 42830 11701895 ~ 11702705 (-)
G224838 NA non-coding upstream 43856 11702921 ~ 11704140 (-)
G224836 NA non-coding upstream 47070 11706135 ~ 11708248 (-)
G223969 LOC106605840 other downstream 367882 11275917 ~ 11278628 (-)
G223942 LOC106576860 other downstream 472143 11172120 ~ 11174367 (-)
znf628 LOC106605829 other downstream 572760 11068525 ~ 11079570 (-)
LOC110508724 prpf31 other downstream 1623307 10019313 ~ 10024005 (-)
G223070 NA other downstream 1631618 10012961 ~ 10014892 (-)
G224869 NA other upstream 93786 11752851 ~ 11753680 (-)
G224873 NA other upstream 136825 11795890 ~ 11796309 (-)
G224954 LOC106576536 other upstream 355861 12014926 ~ 12016101 (-)

Expression


Co-expression Network