G224165


Basic Information

Item Value
gene id G224165
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11696494 ~ 11696725 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU256276
ggttgaagaggcgatgttgcgccttcttcaccacactgtctgtgtgcgtggaccatttcagtttgtcggtaacatgtacaccgaggaacttaaaactttccaccttctccactgctgtcctgtcgatgtggatagggtcggtgctccctttgctgtttcctgaagtccacaatcatctccttcgttttgttgacgttgagtgagaggttattttcctggcatcacactccct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256276 True 232 lncRNA 0.49 1 11696494 11696725

Neighbor

gene id symbol gene type direction distance location
LOC110509388 LOC106576962 coding upstream 13738 11680241 ~ 11682756 (+)
gapdh LOC100135813 coding upstream 23348 11668497 ~ 11673146 (+)
wu:fj39g12 cnp-1 coding upstream 35381 11658813 ~ 11661113 (+)
LOC118964382 NA coding upstream 52734 11643456 ~ 11643760 (+)
LOC118964381 NA coding upstream 56163 11640038 ~ 11640331 (+)
LOC110509555 LOC106575195 coding downstream 12124 11708849 ~ 11727254 (+)
LOC110509537 LOC106575188 coding downstream 41225 11737950 ~ 11747921 (+)
LOC118936286 LOC106575183 coding downstream 57411 11754136 ~ 11776033 (+)
mrpl51 LOC100194563 coding downstream 91767 11788492 ~ 11790660 (+)
LOC110509655 NA coding downstream 94505 11791230 ~ 11808120 (+)
G224163 NA non-coding upstream 2471 11693823 ~ 11694023 (+)
G224138 NA non-coding upstream 77382 11618687 ~ 11619112 (+)
G224116 LOC106575912 non-coding upstream 80519 11613566 ~ 11615975 (+)
G224134 NA non-coding upstream 120036 11576151 ~ 11576458 (+)
G224126 NA non-coding upstream 134513 11561759 ~ 11561981 (+)
G224167 NA non-coding downstream 4327 11701052 ~ 11701355 (+)
G224177 NA non-coding downstream 54989 11751714 ~ 11751899 (+)
G224182 NA non-coding downstream 65223 11761948 ~ 11765453 (+)
G224183 LOC106605731 non-coding downstream 80025 11776750 ~ 11777501 (+)
G224184 LOC106605850 non-coding downstream 81064 11777789 ~ 11778204 (+)
LOC110520911 zyx other upstream 106150 11580308 ~ 11600483 (+)
G224052 gstk1 other upstream 260034 11433120 ~ 11436460 (+)
G224035 NA other upstream 304532 11391333 ~ 11391962 (+)
LOC110509074 LOC106576860 other upstream 522131 11166919 ~ 11174363 (+)
G223748 NA other upstream 652802 11041848 ~ 11043692 (+)
LOC110537447 LOC106577011 other downstream 317783 12005269 ~ 12053650 (+)
G224297 NA other downstream 324240 12020965 ~ 12022444 (+)
LOC110509826 LOC106576393 other downstream 562596 12259134 ~ 12357204 (+)
LOC110503596 LOC106576258 other downstream 672266 12368841 ~ 12430981 (+)

Expression


Co-expression Network