G224852


Basic Information

Item Value
gene id G224852
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11701895 ~ 11702705 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257091
GCCAAAGAGAAaccgtgagagagagaagtgaatgCCGGTGgcagagagtgagggagtgagtgtaCCTGTCCCCACTCTGGGTGATGAGTCTCCTGCAGGTCTCCATCTGCACATCCAGGCCTCTCTTCATAGAACACATCTCCATGTATTCATGTAGGTGACGGTTCATATCACTCTTAGCTGTAGCCAAGTCATACTGGGGAGAAACACATCACTCTTAGCTGTAGCCGAGTCATACTGGGGAGAAACACATCACTCTTAGCTGTAGCCGAGTCATACTGGGGAGAAACACATCACTCTTAGCTGTAGCCAAGTCATACTGGGGAGAAACACATCACTCTTAGCTGTAGCCGAGTCATACTGGGGAGAAACACATCACTCTTAGCTGTAGCCGAGTCATACTGGGGAGAAACACATCACTCTCAGCTGTAGCCGAGTCATACTGGGGAGAAACACATCACTCTTAGCTGTAGCCGAGTCATACTGGGGAGAAACACATCACTCTGAGCTGTAGCCGAGTCATACTGGGGAGAAACACATCACTCTGAGCTGTAGCAGAGTCATACTGGGGAGAAACACATCACTCTTAGCTGTAGCAGAGTCATACTGGGGAGaaacacactgtcaaacattAACATAGCCTTAGACCCCCCCACCACACCTCAATCTGGTCGATGGTCTCTTGGTATTCTTTCTCCCTGGATTTGAATAAGTCCTCAGTGTCATTAATCACCTTCTCCAGACACTGGTCTTCTTGctgagagggcgagagagaaggaaggaaggaggggagagaaggaaggaaggagag

Function

NR:

description
PREDICTED: intermediate filament family orphan 1-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257091 True 811 lncRNA 0.49 1 11701895 11702705

Neighbor

gene id symbol gene type direction distance location
LOC110509335 NA coding downstream 87057 11613213 ~ 11614838 (-)
fam131bb fam131b coding downstream 153154 11503867 ~ 11548741 (-)
LOC110509245 LOC106576972 coding downstream 247529 11449258 ~ 11454366 (-)
LOC110509171 LOC100196661 coding downstream 265267 11433118 ~ 11436628 (-)
styk1b LOC106576787 coding downstream 268906 11424793 ~ 11432989 (-)
LOC110509576 LOC106576947 coding upstream 24579 11727284 ~ 11741584 (-)
LOC110509520 lag-3 coding upstream 73350 11776055 ~ 11779268 (-)
LOC110509592 LOC100136300 coding upstream 105408 11808113 ~ 11811663 (-)
c1r c1r/c1s coding upstream 116908 11819613 ~ 11825101 (-)
LOC110509614 ret1 coding upstream 156013 11858718 ~ 11862407 (-)
G224850 NA non-coding downstream 6035 11695615 ~ 11695860 (-)
G224848 NA non-coding downstream 8180 11693480 ~ 11693715 (-)
G224797 LOC100135813 non-coding downstream 8568 11654879 ~ 11693327 (-)
G224800 NA non-coding downstream 42830 11646510 ~ 11659065 (-)
G224806 NA non-coding downstream 47577 11653263 ~ 11654318 (-)
G224838 NA non-coding upstream 216 11702921 ~ 11704140 (-)
G224836 NA non-coding upstream 3430 11706135 ~ 11708248 (-)
G224867 NA non-coding upstream 47348 11750053 ~ 11750752 (-)
G224868 NA non-coding upstream 49713 11752418 ~ 11752790 (-)
G224869 NA non-coding upstream 50146 11752851 ~ 11753680 (-)
G223969 LOC106605840 other downstream 423267 11275917 ~ 11278628 (-)
G223942 LOC106576860 other downstream 527528 11172120 ~ 11174367 (-)
znf628 LOC106605829 other downstream 628145 11068525 ~ 11079570 (-)
LOC110508724 prpf31 other downstream 1678692 10019313 ~ 10024005 (-)
G223070 NA other downstream 1687003 10012961 ~ 10014892 (-)
G224873 NA other upstream 93185 11795890 ~ 11796309 (-)
G224954 LOC106576536 other upstream 312221 12014926 ~ 12016101 (-)

Expression


Co-expression Network