G224838


Basic Information

Item Value
gene id G224838
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11702921 ~ 11704140 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257077
TTGCTAATAAAGTGATTCATCTAGAGTTTATCTCTCTTGCCAACTAGGCTTTGCTTTGTAAATTGTCTCTGGCTATCTAGTCCGATTTCAGAGCACGCTCATTTGATGAATTTACTAACGCTCAACACacattgaatatggccggtgtcagtaaacgtaggcaaaaaagcgtaatgaaattgttgccagcatcacagttacagtcaccaacactctggataacaaaaacagcctaaccagctctgctagaatGAGTAAAATAGTCAGAGTGCggtgttctctcatttatgtctggaagaagctagcaagctagccaacgttagtcTGTTAGATtgagtgcttgactgccgttgtgaggtcagaaggctcggatcaaccctactcctcggccggAGCGAAACACTCcgaatttacgaacggacaatctgacaatgctttgaatttacgaacgcccagagcgcaCCCTGGCACTccagtgaatttacgaacacaccctaaGGCTTATATTTACTGTGTTATACTTCTAGGTGAGTTTGAAAACAACCCTCATAATGTTGCAACAGGACAGCAGCACACTGTTAGAATGATCTGCTATGCTAGCCTGACATGAatctattggtgtgtgtgtgtgtggtgtgtttatcATTATGGCTGTGTGGAAATGGATCATGCTATAGGAGTTAATACCATGGTTCTCTGTAGTACCAACAACTACCTTAAGAGTACACGCTAGCCTACAACTCATATGAGTTCATTCAAATATTGCTCATATGTTTCTATGAGGTATTCTCAATTCAAGTTGTGTATTTCAATCCATTACCTCGTTACCTTTGCTCTGTTAAACAGTGGGTTCTTATGTACAGACTTCCATGGTGCTAGTAATACCACTTTCCAGTAGAGGGGACTAAAATCTGTTGGAAACACAACACTACACCCTCGCTAAAACAGATTGATCTGCCACGTTCCTATATTGAGGCTTGTGAATGAAGATAGCTTGAAGAAAATTAAAAATAGACtaatctagtggttagaatgGAAACGTGGCGTTGCTATAGTGACGGCGGAGTGGTGCTGTGGTTGGATGGAATGACGGTCATGTGATAGAGGTGGTCTTGATGGGTCATGATCTGggaggagagttggagagaggaggCGACGCTGTTGTCCCTTCCTTCTCAGCCTGGTCAACGCTCTCCTCACCAGCCACAGCCACAGGAGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257077 True 1220 lncRNA 0.44 1 11702921 11704140

Neighbor

gene id symbol gene type direction distance location
LOC110509335 NA coding downstream 88083 11613213 ~ 11614838 (-)
fam131bb fam131b coding downstream 154180 11503867 ~ 11548741 (-)
LOC110509245 LOC106576972 coding downstream 248555 11449258 ~ 11454366 (-)
LOC110509171 LOC100196661 coding downstream 266293 11433118 ~ 11436628 (-)
styk1b LOC106576787 coding downstream 269932 11424793 ~ 11432989 (-)
LOC110509576 LOC106576947 coding upstream 23144 11727284 ~ 11741584 (-)
LOC110509520 lag-3 coding upstream 71915 11776055 ~ 11779268 (-)
LOC110509592 LOC100136300 coding upstream 103973 11808113 ~ 11811663 (-)
c1r c1r/c1s coding upstream 115473 11819613 ~ 11825101 (-)
LOC110509614 ret1 coding upstream 154578 11858718 ~ 11862407 (-)
G224852 NA non-coding downstream 216 11701895 ~ 11702705 (-)
G224850 NA non-coding downstream 7061 11695615 ~ 11695860 (-)
G224848 NA non-coding downstream 9206 11693480 ~ 11693715 (-)
G224797 LOC100135813 non-coding downstream 9594 11654879 ~ 11693327 (-)
G224800 NA non-coding downstream 43856 11646510 ~ 11659065 (-)
G224836 NA non-coding upstream 1995 11706135 ~ 11708248 (-)
G224867 NA non-coding upstream 45913 11750053 ~ 11750752 (-)
G224868 NA non-coding upstream 48278 11752418 ~ 11752790 (-)
G224869 NA non-coding upstream 48711 11752851 ~ 11753680 (-)
G224874 NA non-coding upstream 77270 11781410 ~ 11781727 (-)
G223969 LOC106605840 other downstream 424293 11275917 ~ 11278628 (-)
G223942 LOC106576860 other downstream 528554 11172120 ~ 11174367 (-)
znf628 LOC106605829 other downstream 629171 11068525 ~ 11079570 (-)
LOC110508724 prpf31 other downstream 1679718 10019313 ~ 10024005 (-)
G223070 NA other downstream 1688029 10012961 ~ 10014892 (-)
G224873 NA other upstream 91750 11795890 ~ 11796309 (-)
G224954 LOC106576536 other upstream 310786 12014926 ~ 12016101 (-)

Expression


Co-expression Network