G224867


Basic Information

Item Value
gene id G224867
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11750053 ~ 11750752 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257107
gatatacagtggggagaacaagtatttgatacactgccgattttgcaggttttcctacttacaaagcatgtagaggtctgtcatttttatcataggtacacttcaactgtgagagacggaatctaaaacaaaaatccagaaaatcacattgtatgatttttaagtaattaatttgcattttattacataacataagtatttgatacatcagaaaagcagaacttaatatttggtacagaaacctgtttgcaattacagagatcatacgtttcctgtagttcttgaccaggtttgcacacactgcagcagggattttggcccactcctccatacagaccttctccagatccttcaggtttcggggctgtcgctgggcaatatggactttcagctccctccaaagattttctattgagttcaggtctggagactggctaggccactccaggaccttgagatgcttcttacggagccactccttagttgccctggctgtgtgtttcgggtcgttgtcatgctggaagacccagccacgacccatcttcaatgctcttactgagggaaggaggttgttggccaagatctcgcgatacatggccccatccatcctaccctcaatacggtgcagtcgtcctgtcccctttgcagaaaagcatccccaaagaatgatgtttccatctccatgcttcacggttgggat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257107 True 700 lncRNA 0.34 1 11750053 11750752

Neighbor

gene id symbol gene type direction distance location
LOC110509576 LOC106576947 coding downstream 11997 11727284 ~ 11741584 (-)
LOC110509335 NA coding downstream 135215 11613213 ~ 11614838 (-)
fam131bb fam131b coding downstream 201312 11503867 ~ 11548741 (-)
LOC110509245 LOC106576972 coding downstream 295687 11449258 ~ 11454366 (-)
LOC110509171 LOC100196661 coding downstream 313425 11433118 ~ 11436628 (-)
LOC110509520 lag-3 coding upstream 25303 11776055 ~ 11779268 (-)
LOC110509592 LOC100136300 coding upstream 57361 11808113 ~ 11811663 (-)
c1r c1r/c1s coding upstream 68861 11819613 ~ 11825101 (-)
LOC110509614 ret1 coding upstream 107966 11858718 ~ 11862407 (-)
LOC110509511 ptn6 coding upstream 112237 11862989 ~ 11895102 (-)
G224836 NA non-coding downstream 41805 11706135 ~ 11708248 (-)
G224838 NA non-coding downstream 45913 11702921 ~ 11704140 (-)
G224852 NA non-coding downstream 47348 11701895 ~ 11702705 (-)
G224850 NA non-coding downstream 54193 11695615 ~ 11695860 (-)
G224848 NA non-coding downstream 56338 11693480 ~ 11693715 (-)
G224868 NA non-coding upstream 1666 11752418 ~ 11752790 (-)
G224869 NA non-coding upstream 2099 11752851 ~ 11753680 (-)
G224874 NA non-coding upstream 30658 11781410 ~ 11781727 (-)
G224870 NA non-coding upstream 55385 11806137 ~ 11808096 (-)
G224899 NA non-coding upstream 66308 11817060 ~ 11819210 (-)
G223969 LOC106605840 other downstream 471425 11275917 ~ 11278628 (-)
G223942 LOC106576860 other downstream 575686 11172120 ~ 11174367 (-)
znf628 LOC106605829 other downstream 676303 11068525 ~ 11079570 (-)
LOC110508724 prpf31 other downstream 1726850 10019313 ~ 10024005 (-)
G224873 NA other upstream 45138 11795890 ~ 11796309 (-)
G224954 LOC106576536 other upstream 264174 12014926 ~ 12016101 (-)
G224988 LOC106605856 other upstream 320535 12071287 ~ 12081233 (-)

Expression


Co-expression Network