G224182


Basic Information

Item Value
gene id G224182
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11761948 ~ 11765453 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU256297
tattttaattccaggttgtaaggcaacaaaataggaaaaatgccacgggggggtgaatactttcgcaagcaacTGAATGAATGATCCCTCCGtaccttttacaacatatctctttctcccaccctctctctctctctctctctctctctctctccctaccttttacaacatatctctttctcccaccccctctcttcctacctttacaacatatctctttttccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256297 True 225 lncRNA 0.49 2 11761948 11765453

Neighbor

gene id symbol gene type direction distance location
LOC110509537 LOC106575188 coding upstream 14027 11737950 ~ 11747921 (+)
LOC110509555 LOC106575195 coding upstream 34694 11708849 ~ 11727254 (+)
iffo1b LOC106576644 coding upstream 53697 11683066 ~ 11708251 (+)
LOC110509388 LOC106576962 coding upstream 79192 11680241 ~ 11682756 (+)
gapdh LOC100135813 coding upstream 88802 11668497 ~ 11673146 (+)
mrpl51 LOC100194563 coding downstream 23039 11788492 ~ 11790660 (+)
LOC110509655 NA coding downstream 25777 11791230 ~ 11808120 (+)
tnfr tnfr coding downstream 72430 11837883 ~ 11858967 (+)
LOC110509543 LOC106576564 coding downstream 192319 11957772 ~ 11966128 (+)
LOC110509582 mlf2 coding downstream 214854 11927476 ~ 11985113 (+)
G224177 NA non-coding upstream 10049 11751714 ~ 11751899 (+)
G224167 NA non-coding upstream 60593 11701052 ~ 11701355 (+)
G224165 NA non-coding upstream 65223 11696494 ~ 11696725 (+)
G224163 NA non-coding upstream 67925 11693823 ~ 11694023 (+)
G224138 NA non-coding upstream 142836 11618687 ~ 11619112 (+)
G224183 LOC106605731 non-coding downstream 11297 11776750 ~ 11777501 (+)
G224184 LOC106605850 non-coding downstream 12336 11777789 ~ 11778204 (+)
G224189 c1r/c1s non-coding downstream 20034 11785487 ~ 11836170 (+)
G224197 NA non-coding downstream 43295 11808748 ~ 11809478 (+)
LOC110520911 zyx other upstream 171604 11580308 ~ 11600483 (+)
G224052 gstk1 other upstream 325488 11433120 ~ 11436460 (+)
G224035 NA other upstream 369986 11391333 ~ 11391962 (+)
LOC110509074 LOC106576860 other upstream 587585 11166919 ~ 11174363 (+)
G223748 NA other upstream 718256 11041848 ~ 11043692 (+)
LOC110537447 LOC106577011 other downstream 249055 12005269 ~ 12053650 (+)
G224297 NA other downstream 255512 12020965 ~ 12022444 (+)
LOC110509826 LOC106576393 other downstream 493868 12259134 ~ 12357204 (+)
LOC110503596 LOC106576258 other downstream 603538 12368841 ~ 12430981 (+)

Expression


Co-expression Network