Gene
RNA
| Item | Value |
|---|---|
| gene id | G224184 |
| gene name | LOC106605850 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 11777789 ~ 11778204 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106605731, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU256300 | True | 416 | lncRNA | 0.29 | 1 | 11777789 | 11778204 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118936286 | LOC106575183 | coding | upstream | 1756 | 11754136 ~ 11776033 (+) |
| LOC110509537 | LOC106575188 | coding | upstream | 29868 | 11737950 ~ 11747921 (+) |
| LOC110509555 | LOC106575195 | coding | upstream | 50535 | 11708849 ~ 11727254 (+) |
| iffo1b | LOC106576644 | coding | upstream | 69538 | 11683066 ~ 11708251 (+) |
| LOC110509388 | LOC106576962 | coding | upstream | 95033 | 11680241 ~ 11682756 (+) |
| mrpl51 | LOC100194563 | coding | downstream | 10288 | 11788492 ~ 11790660 (+) |
| LOC110509655 | NA | coding | downstream | 13026 | 11791230 ~ 11808120 (+) |
| tnfr | tnfr | coding | downstream | 59679 | 11837883 ~ 11858967 (+) |
| LOC110509543 | LOC106576564 | coding | downstream | 179568 | 11957772 ~ 11966128 (+) |
| LOC110509582 | mlf2 | coding | downstream | 202103 | 11927476 ~ 11985113 (+) |
| G224183 | LOC106605731 | non-coding | upstream | 288 | 11776750 ~ 11777501 (+) |
| G224182 | NA | non-coding | upstream | 12336 | 11761948 ~ 11765453 (+) |
| G224177 | NA | non-coding | upstream | 25890 | 11751714 ~ 11751899 (+) |
| G224167 | NA | non-coding | upstream | 76434 | 11701052 ~ 11701355 (+) |
| G224165 | NA | non-coding | upstream | 81064 | 11696494 ~ 11696725 (+) |
| G224189 | c1r/c1s | non-coding | downstream | 7283 | 11785487 ~ 11836170 (+) |
| G224197 | NA | non-coding | downstream | 30544 | 11808748 ~ 11809478 (+) |
| G224225 | NA | non-coding | downstream | 130827 | 11909031 ~ 11909554 (+) |
| LOC110520911 | zyx | other | upstream | 187445 | 11580308 ~ 11600483 (+) |
| G224052 | gstk1 | other | upstream | 341329 | 11433120 ~ 11436460 (+) |
| G224035 | NA | other | upstream | 385827 | 11391333 ~ 11391962 (+) |
| LOC110509074 | LOC106576860 | other | upstream | 603426 | 11166919 ~ 11174363 (+) |
| G223748 | NA | other | upstream | 734097 | 11041848 ~ 11043692 (+) |
| LOC110537447 | LOC106577011 | other | downstream | 236304 | 12005269 ~ 12053650 (+) |
| G224297 | NA | other | downstream | 242761 | 12020965 ~ 12022444 (+) |
| LOC110509826 | LOC106576393 | other | downstream | 481117 | 12259134 ~ 12357204 (+) |
| LOC110503596 | LOC106576258 | other | downstream | 590787 | 12368841 ~ 12430981 (+) |
