Gene
RNA
| Item | Value |
|---|---|
| gene id | G224873 |
| gene name | NA |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 11795890 ~ 11796309 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| vesicle-associated membrane protein 1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU257122 | True | 360 | TUCP | 0.53 | 3 | 11795890 | 11796309 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509520 | lag-3 | coding | downstream | 16622 | 11776055 ~ 11779268 (-) |
| LOC110509576 | LOC106576947 | coding | downstream | 57834 | 11727284 ~ 11741584 (-) |
| LOC110509335 | NA | coding | downstream | 181052 | 11613213 ~ 11614838 (-) |
| fam131bb | fam131b | coding | downstream | 247149 | 11503867 ~ 11548741 (-) |
| LOC110509245 | LOC106576972 | coding | downstream | 341524 | 11449258 ~ 11454366 (-) |
| LOC110509592 | LOC100136300 | coding | upstream | 11804 | 11808113 ~ 11811663 (-) |
| c1r | c1r/c1s | coding | upstream | 23304 | 11819613 ~ 11825101 (-) |
| LOC110509614 | ret1 | coding | upstream | 62409 | 11858718 ~ 11862407 (-) |
| LOC110509511 | ptn6 | coding | upstream | 66680 | 11862989 ~ 11895102 (-) |
| LOC110509399 | LOC106576265 | coding | upstream | 99334 | 11895643 ~ 11950574 (-) |
| G224874 | NA | non-coding | downstream | 14163 | 11781410 ~ 11781727 (-) |
| G224869 | NA | non-coding | downstream | 42210 | 11752851 ~ 11753680 (-) |
| G224868 | NA | non-coding | downstream | 43100 | 11752418 ~ 11752790 (-) |
| G224867 | NA | non-coding | downstream | 45138 | 11750053 ~ 11750752 (-) |
| G224836 | NA | non-coding | downstream | 87642 | 11706135 ~ 11708248 (-) |
| G224870 | NA | non-coding | upstream | 9828 | 11806137 ~ 11808096 (-) |
| G224899 | NA | non-coding | upstream | 20751 | 11817060 ~ 11819210 (-) |
| G224918 | NA | non-coding | upstream | 67501 | 11863810 ~ 11865070 (-) |
| G224919 | NA | non-coding | upstream | 69053 | 11865362 ~ 11865765 (-) |
| G224920 | NA | non-coding | upstream | 69628 | 11865937 ~ 11866284 (-) |
| G223969 | LOC106605840 | other | downstream | 517262 | 11275917 ~ 11278628 (-) |
| G223942 | LOC106576860 | other | downstream | 621523 | 11172120 ~ 11174367 (-) |
| znf628 | LOC106605829 | other | downstream | 722140 | 11068525 ~ 11079570 (-) |
| G224954 | LOC106576536 | other | upstream | 218617 | 12014926 ~ 12016101 (-) |
| G224988 | LOC106605856 | other | upstream | 274978 | 12071287 ~ 12081233 (-) |
| G225099 | NA | other | upstream | 539932 | 12336241 ~ 12340966 (-) |
| G225127 | LOC106605865 | other | upstream | 658079 | 12454388 ~ 12457791 (-) |
