Gene
RNA
| Item | Value |
|---|---|
| gene id | G224918 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 11863810 ~ 11865070 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU257173 | True | 371 | lncRNA | 0.42 | 2 | 11863810 | 11865070 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509614 | ret1 | coding | downstream | 1403 | 11858718 ~ 11862407 (-) |
| c1r | c1r/c1s | coding | downstream | 38709 | 11819613 ~ 11825101 (-) |
| LOC110509592 | LOC100136300 | coding | downstream | 52147 | 11808113 ~ 11811663 (-) |
| LOC110509520 | lag-3 | coding | downstream | 84542 | 11776055 ~ 11779268 (-) |
| LOC110509576 | LOC106576947 | coding | downstream | 125754 | 11727284 ~ 11741584 (-) |
| LOC110509399 | LOC106576265 | coding | upstream | 30573 | 11895643 ~ 11950574 (-) |
| LOC110509608 | LOC105029961 | coding | upstream | 101128 | 11966198 ~ 11977986 (-) |
| LOC110509712 | LOC106576526 | coding | upstream | 191076 | 12056146 ~ 12068253 (-) |
| LOC118945807 | LOC106605860 | coding | upstream | 205134 | 12070204 ~ 12072287 (-) |
| LOC110503589 | LOC106576508 | coding | upstream | 212014 | 12077084 ~ 12086948 (-) |
| G224899 | NA | non-coding | downstream | 44600 | 11817060 ~ 11819210 (-) |
| G224870 | NA | non-coding | downstream | 55714 | 11806137 ~ 11808096 (-) |
| G224874 | NA | non-coding | downstream | 82083 | 11781410 ~ 11781727 (-) |
| G224869 | NA | non-coding | downstream | 110130 | 11752851 ~ 11753680 (-) |
| G224868 | NA | non-coding | downstream | 111020 | 11752418 ~ 11752790 (-) |
| G224919 | NA | non-coding | upstream | 292 | 11865362 ~ 11865765 (-) |
| G224920 | NA | non-coding | upstream | 867 | 11865937 ~ 11866284 (-) |
| G224931 | NA | non-coding | upstream | 26022 | 11891092 ~ 11897894 (-) |
| G224938 | NA | non-coding | upstream | 54538 | 11919608 ~ 11923227 (-) |
| G224889 | NA | non-coding | upstream | 62383 | 11927453 ~ 11985092 (-) |
| G224873 | NA | other | downstream | 67501 | 11795890 ~ 11796309 (-) |
| G223969 | LOC106605840 | other | downstream | 585182 | 11275917 ~ 11278628 (-) |
| G224954 | LOC106576536 | other | upstream | 149856 | 12014926 ~ 12016101 (-) |
| G224988 | LOC106605856 | other | upstream | 206217 | 12071287 ~ 12081233 (-) |
| G225099 | NA | other | upstream | 471171 | 12336241 ~ 12340966 (-) |
| G225127 | LOC106605865 | other | upstream | 589318 | 12454388 ~ 12457791 (-) |
| G225171 | LOC106605713 | other | upstream | 607229 | 12472299 ~ 12473060 (-) |
