Gene
RNA
| Item | Value |
|---|---|
| gene id | G224889 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 11927453 ~ 11985092 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU257143 | True | 1001 | lncRNA | 0.39 | 2 | 11927453 | 11985092 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509511 | ptn6 | coding | downstream | 32351 | 11862989 ~ 11895102 (-) |
| LOC110509614 | ret1 | coding | downstream | 65046 | 11858718 ~ 11862407 (-) |
| c1r | c1r/c1s | coding | downstream | 102352 | 11819613 ~ 11825101 (-) |
| LOC110509592 | LOC100136300 | coding | downstream | 115790 | 11808113 ~ 11811663 (-) |
| LOC110509520 | lag-3 | coding | downstream | 148185 | 11776055 ~ 11779268 (-) |
| LOC110509712 | LOC106576526 | coding | upstream | 71054 | 12056146 ~ 12068253 (-) |
| LOC118945807 | LOC106605860 | coding | upstream | 85112 | 12070204 ~ 12072287 (-) |
| LOC110503589 | LOC106576508 | coding | upstream | 91992 | 12077084 ~ 12086948 (-) |
| LOC110509720 | LOC106576492 | coding | upstream | 102082 | 12087174 ~ 12089471 (-) |
| LOC110509756 | LOC106605861 | coding | upstream | 126291 | 12111383 ~ 12112865 (-) |
| G224938 | NA | non-coding | downstream | 4226 | 11919608 ~ 11923227 (-) |
| G224931 | NA | non-coding | downstream | 29559 | 11891092 ~ 11897894 (-) |
| G224920 | NA | non-coding | downstream | 61169 | 11865937 ~ 11866284 (-) |
| G224919 | NA | non-coding | downstream | 61688 | 11865362 ~ 11865765 (-) |
| G224918 | NA | non-coding | downstream | 62383 | 11863810 ~ 11865070 (-) |
| G224969 | NA | non-coding | upstream | 369 | 11985461 ~ 11985691 (-) |
| G224978 | LOC106595066 | non-coding | upstream | 9126 | 11994218 ~ 11996447 (-) |
| G224955 | NA | non-coding | upstream | 32165 | 12017257 ~ 12017470 (-) |
| G224953 | NA | non-coding | upstream | 32501 | 12017593 ~ 12108160 (-) |
| G224956 | NA | non-coding | upstream | 35873 | 12020965 ~ 12053769 (-) |
| G224873 | NA | other | downstream | 131144 | 11795890 ~ 11796309 (-) |
| G224869 | NA | other | downstream | 173773 | 11752851 ~ 11753680 (-) |
| LOC110509576 | LOC106576947 | other | downstream | 185869 | 11727284 ~ 11741584 (-) |
| G223969 | LOC106605840 | other | downstream | 648825 | 11275917 ~ 11278628 (-) |
| G224954 | LOC106576536 | other | upstream | 29834 | 12014926 ~ 12016101 (-) |
| G224988 | LOC106605856 | other | upstream | 86195 | 12071287 ~ 12081233 (-) |
| G225099 | NA | other | upstream | 351149 | 12336241 ~ 12340966 (-) |
| G225127 | LOC106605865 | other | upstream | 469296 | 12454388 ~ 12457791 (-) |
| G225171 | LOC106605713 | other | upstream | 487207 | 12472299 ~ 12473060 (-) |
