G224267


Basic Information

Item Value
gene id G224267
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 11959292 ~ 11959895 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU256397
ctctctcccttcactgtgTCTTCTCTGTCCCTTTGGTCTACTGGTctttctcttgtcctctctctctttctccctcccttcactgTGTCTTCTCTGTCCCTTTGGTCTACTGGTctttctcttgtcctctctcccttcactgtgTCTTCTCTGTCCCTTTGGTCTACTGGTctttctcttgtcctctctcccttcactgtgTCTTCTCTGTCCCTTTTGTCTACTGGTctttctcttgtcctctctctccctcccttcactgtGTCTTCTCTGTCCCTTTTGTCTACTGGTctttctcttgtcctctctctccccccttcactgtGTCTTCTCTGTCCCTTTTGTCTGCTGGtctttct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256397 True 359 lncRNA 0.49 3 11959292 11959895

Neighbor

gene id symbol gene type direction distance location
tnfr tnfr coding upstream 100325 11837883 ~ 11858967 (+)
LOC110509655 NA coding upstream 151172 11791230 ~ 11808120 (+)
mrpl51 LOC100194563 coding upstream 168632 11788492 ~ 11790660 (+)
LOC118936286 LOC106575183 coding upstream 183259 11754136 ~ 11776033 (+)
LOC110509537 LOC106575188 coding upstream 211371 11737950 ~ 11747921 (+)
LOC110509582 mlf2 coding downstream 20412 11927476 ~ 11985113 (+)
LOC110509600 LOC106576545 coding downstream 27358 11987253 ~ 12004723 (+)
LOC110537447 LOC106577011 coding downstream 45374 12005269 ~ 12053650 (+)
LOC110509740 LOC106605858 coding downstream 130006 12089901 ~ 12108140 (+)
LOC110509764 NA coding downstream 137032 12096927 ~ 12103146 (+)
G224225 NA non-coding upstream 49738 11909031 ~ 11909554 (+)
G224189 c1r/c1s non-coding upstream 123122 11785487 ~ 11836170 (+)
G224197 NA non-coding upstream 149814 11808748 ~ 11809478 (+)
G224184 LOC106605850 non-coding upstream 181088 11777789 ~ 11778204 (+)
G224294 NA non-coding downstream 56572 12016467 ~ 12016767 (+)
G224295 NA non-coding downstream 57012 12016907 ~ 12017156 (+)
G224296 NA non-coding downstream 60055 12019950 ~ 12020685 (+)
G224308 LOC106576519 non-coding downstream 110321 12070216 ~ 12078021 (+)
G224309 NA non-coding downstream 124883 12084778 ~ 12088970 (+)
LOC110520911 zyx other upstream 368948 11580308 ~ 11600483 (+)
G224052 gstk1 other upstream 522832 11433120 ~ 11436460 (+)
G224035 NA other upstream 567330 11391333 ~ 11391962 (+)
LOC110509074 LOC106576860 other upstream 784929 11166919 ~ 11174363 (+)
G224297 NA other downstream 61070 12020965 ~ 12022444 (+)
LOC110509826 LOC106576393 other downstream 299426 12259134 ~ 12357204 (+)
LOC110503596 LOC106576258 other downstream 409096 12368841 ~ 12430981 (+)
grik5 grik5 other downstream 700725 12497538 ~ 12664742 (+)

Expression


Co-expression Network