Gene
RNA
| Item | Value |
|---|---|
| gene id | G224954 |
| gene name | LOC106576536 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 12014926 ~ 12016101 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| arginine-glutamic acid dipeptide repeats protein-like, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU257215 | True | 1176 | TUCP | 0.60 | 1 | 12014926 | 12016101 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509608 | LOC105029961 | coding | downstream | 36940 | 11966198 ~ 11977986 (-) |
| LOC110509399 | LOC106576265 | coding | downstream | 64352 | 11895643 ~ 11950574 (-) |
| LOC110509511 | ptn6 | coding | downstream | 119824 | 11862989 ~ 11895102 (-) |
| LOC110509614 | ret1 | coding | downstream | 152519 | 11858718 ~ 11862407 (-) |
| c1r | c1r/c1s | coding | downstream | 189825 | 11819613 ~ 11825101 (-) |
| LOC110509712 | LOC106576526 | coding | upstream | 40045 | 12056146 ~ 12068253 (-) |
| LOC118945807 | LOC106605860 | coding | upstream | 54103 | 12070204 ~ 12072287 (-) |
| LOC110503589 | LOC106576508 | coding | upstream | 60983 | 12077084 ~ 12086948 (-) |
| LOC110509720 | LOC106576492 | coding | upstream | 71073 | 12087174 ~ 12089471 (-) |
| LOC110509756 | LOC106605861 | coding | upstream | 95282 | 12111383 ~ 12112865 (-) |
| G224978 | LOC106595066 | non-coding | downstream | 18479 | 11994218 ~ 11996447 (-) |
| G224969 | NA | non-coding | downstream | 29235 | 11985461 ~ 11985691 (-) |
| G224889 | NA | non-coding | downstream | 29834 | 11927453 ~ 11985092 (-) |
| G224938 | NA | non-coding | downstream | 91699 | 11919608 ~ 11923227 (-) |
| G224931 | NA | non-coding | downstream | 117032 | 11891092 ~ 11897894 (-) |
| G224955 | NA | non-coding | upstream | 1156 | 12017257 ~ 12017470 (-) |
| G224953 | NA | non-coding | upstream | 1492 | 12017593 ~ 12108160 (-) |
| G224956 | NA | non-coding | upstream | 4864 | 12020965 ~ 12053769 (-) |
| G224959 | NA | non-coding | upstream | 29291 | 12045392 ~ 12049537 (-) |
| G225019 | NA | non-coding | upstream | 120350 | 12136451 ~ 12139918 (-) |
| LOC110509592 | LOC100136300 | other | downstream | 205580 | 11808113 ~ 11811663 (-) |
| G224873 | NA | other | downstream | 218617 | 11795890 ~ 11796309 (-) |
| G224869 | NA | other | downstream | 261246 | 11752851 ~ 11753680 (-) |
| LOC110509576 | LOC106576947 | other | downstream | 273342 | 11727284 ~ 11741584 (-) |
| G223969 | LOC106605840 | other | downstream | 736298 | 11275917 ~ 11278628 (-) |
| G224988 | LOC106605856 | other | upstream | 55186 | 12071287 ~ 12081233 (-) |
| G225099 | NA | other | upstream | 320140 | 12336241 ~ 12340966 (-) |
| G225127 | LOC106605865 | other | upstream | 438287 | 12454388 ~ 12457791 (-) |
| G225171 | LOC106605713 | other | upstream | 456198 | 12472299 ~ 12473060 (-) |
| G226124 | NA | other | upstream | 1050772 | 13066873 ~ 13067357 (-) |
