Gene
RNA
| Item | Value |
|---|---|
| gene id | G224295 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 12016907 ~ 12017156 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU256426 | True | 250 | lncRNA | 0.43 | 1 | 12016907 | 12017156 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509600 | LOC106576545 | coding | upstream | 12184 | 11987253 ~ 12004723 (+) |
| LOC110509582 | mlf2 | coding | upstream | 31794 | 11927476 ~ 11985113 (+) |
| LOC110509543 | LOC106576564 | coding | upstream | 50779 | 11957772 ~ 11966128 (+) |
| tnfr | tnfr | coding | upstream | 157940 | 11837883 ~ 11858967 (+) |
| LOC110509655 | NA | coding | upstream | 208787 | 11791230 ~ 11808120 (+) |
| LOC110509740 | LOC106605858 | coding | downstream | 72745 | 12089901 ~ 12108140 (+) |
| LOC110509764 | NA | coding | downstream | 79771 | 12096927 ~ 12103146 (+) |
| LOC110537505 | LOC106576414 | coding | downstream | 137058 | 12154214 ~ 12241744 (+) |
| LOC118945814 | NA | coding | downstream | 225884 | 12243040 ~ 12247913 (+) |
| LOC110509826 | LOC106576393 | coding | downstream | 241978 | 12259134 ~ 12357204 (+) |
| G224294 | NA | non-coding | upstream | 140 | 12016467 ~ 12016767 (+) |
| G224267 | NA | non-coding | upstream | 57012 | 11959292 ~ 11959895 (+) |
| G224225 | NA | non-coding | upstream | 107353 | 11909031 ~ 11909554 (+) |
| G224189 | c1r/c1s | non-coding | upstream | 180737 | 11785487 ~ 11836170 (+) |
| G224296 | NA | non-coding | downstream | 2794 | 12019950 ~ 12020685 (+) |
| G224308 | LOC106576519 | non-coding | downstream | 53060 | 12070216 ~ 12078021 (+) |
| G224309 | NA | non-coding | downstream | 67622 | 12084778 ~ 12088970 (+) |
| G224307 | dedd2 | non-coding | downstream | 82306 | 12099462 ~ 12108376 (+) |
| G224317 | NA | non-coding | downstream | 92625 | 12109781 ~ 12110023 (+) |
| LOC110537447 | LOC106577011 | other | upstream | 2102 | 12005269 ~ 12053650 (+) |
| mrpl51 | LOC100194563 | other | upstream | 226268 | 11788492 ~ 11790660 (+) |
| LOC110520911 | zyx | other | upstream | 426563 | 11580308 ~ 11600483 (+) |
| G224052 | gstk1 | other | upstream | 580447 | 11433120 ~ 11436460 (+) |
| G224035 | NA | other | upstream | 624945 | 11391333 ~ 11391962 (+) |
| G224297 | NA | other | downstream | 3809 | 12020965 ~ 12022444 (+) |
| LOC110503596 | LOC106576258 | other | downstream | 351835 | 12368841 ~ 12430981 (+) |
| grik5 | grik5 | other | downstream | 643464 | 12497538 ~ 12664742 (+) |
| G225451 | NA | other | downstream | 948876 | 12966032 ~ 12966533 (+) |
