G224296


Basic Information

Item Value
gene id G224296
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12019950 ~ 12020685 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU256427
tctcccttctctactcctcctctcacctgtctatctccttctccactcctcctctcacctgtctctccttttctccactcctcctctcacctgtctatctccttctccactcctcctctcacctgtctctctccttctccactcctcctctcacctgtctctctcttctccactcctcctctcacctgtctatctccttctccactcctcctctcacctgtctatctccttctccactcctcctctaccggtcaatctccttctccactcctcctcttaccgatttctcccttctccactcctcctctcacctgtctctcttctacactcctcttctcacctgtctatctccttctccactcctcctctcacctgtctatctccttctccactcctcctctcacctctctctgcccttctccactcctcctctcacctgtctatctccttctccactcctcctctcacctctctctgcccttctccactcctcctctcacctgtctatctccttctccactcctcccctcacctgtctctcccttctcaaaTCCTCCTCTCAATtgtctacctcctcctccactcctcctctcacctgtatctctcttctccactcctcctctcacctgtctatctccttc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256427 True 641 lncRNA 0.54 2 12019950 12020685

Neighbor

gene id symbol gene type direction distance location
LOC110509600 LOC106576545 coding upstream 15227 11987253 ~ 12004723 (+)
LOC110509582 mlf2 coding upstream 34837 11927476 ~ 11985113 (+)
LOC110509543 LOC106576564 coding upstream 53822 11957772 ~ 11966128 (+)
tnfr tnfr coding upstream 160983 11837883 ~ 11858967 (+)
LOC110509655 NA coding upstream 211830 11791230 ~ 11808120 (+)
LOC110509740 LOC106605858 coding downstream 69216 12089901 ~ 12108140 (+)
LOC110509764 NA coding downstream 76242 12096927 ~ 12103146 (+)
LOC110537505 LOC106576414 coding downstream 133529 12154214 ~ 12241744 (+)
LOC118945814 NA coding downstream 222355 12243040 ~ 12247913 (+)
LOC110509826 LOC106576393 coding downstream 238449 12259134 ~ 12357204 (+)
G224295 NA non-coding upstream 2794 12016907 ~ 12017156 (+)
G224294 NA non-coding upstream 3183 12016467 ~ 12016767 (+)
G224267 NA non-coding upstream 60055 11959292 ~ 11959895 (+)
G224225 NA non-coding upstream 110396 11909031 ~ 11909554 (+)
G224308 LOC106576519 non-coding downstream 49531 12070216 ~ 12078021 (+)
G224309 NA non-coding downstream 64093 12084778 ~ 12088970 (+)
G224307 dedd2 non-coding downstream 78777 12099462 ~ 12108376 (+)
G224317 NA non-coding downstream 89096 12109781 ~ 12110023 (+)
G224328 NA non-coding downstream 101951 12122636 ~ 12123053 (+)
LOC110537447 LOC106577011 other upstream 5145 12005269 ~ 12053650 (+)
mrpl51 LOC100194563 other upstream 229311 11788492 ~ 11790660 (+)
LOC110520911 zyx other upstream 429606 11580308 ~ 11600483 (+)
G224052 gstk1 other upstream 583490 11433120 ~ 11436460 (+)
G224035 NA other upstream 627988 11391333 ~ 11391962 (+)
G224297 NA other downstream 280 12020965 ~ 12022444 (+)
LOC110503596 LOC106576258 other downstream 348306 12368841 ~ 12430981 (+)
grik5 grik5 other downstream 639935 12497538 ~ 12664742 (+)
G225451 NA other downstream 945347 12966032 ~ 12966533 (+)

Expression


Co-expression Network