XLOC_021866 (dre-mir-10b-2)


Basic Information

Item Value
gene id XLOC_021866
gene name dre-mir-10b-2
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007134.7
NCBI id CM002907.2
chromosome length 46223584
location 36130001 ~ 36130092 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00043339
GTAGTCGTCTATATGTACCCTGTAGAACCGAATTTGTGTCCAAAACATCAAAATCGCAAATACGTCTCTACAGGAATACATGGGCGACGTAA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000082918

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00043339 True 92 miRNA 0.41 1 36130001 36130092

Neighbor

gene id symbol gene type direction distance location
XLOC_021865 hoxc5a coding upstream 9490 36118738 ~ 36120511 (+)
XLOC_021864 hoxc6a coding upstream 13094 36115541 ~ 36116907 (+)
XLOC_021863 hoxc8a coding upstream 26366 36101185 ~ 36103635 (+)
XLOC_021862 hoxc9a coding upstream 32513 36095260 ~ 36097488 (+)
XLOC_021861 mir196a-1 coding upstream 41805 36088091 ~ 36088196 (+)
XLOC_021867 hoxc4a coding downstream 791 36130883 ~ 36132563 (+)
XLOC_021868 BX005254.2 coding downstream 20338 36150430 ~ 36154411 (+)
XLOC_021869 hoxc1a coding downstream 48012 36178104 ~ 36190988 (+)
XLOC_021870 hnrnpa1b coding downstream 176447 36306539 ~ 36310418 (+)
XLOC_021871 NA coding downstream 187257 36317349 ~ 36317913 (+)
XLOC_021854 BX465853.1 non-coding upstream 331722 35790808 ~ 35798279 (+)
XLOC_021852 NA non-coding upstream 399939 35729255 ~ 35730062 (+)
XLOC_021851 NA non-coding upstream 402479 35723438 ~ 35727522 (+)
XLOC_021848 NA non-coding upstream 427280 35694272 ~ 35702721 (+)
XLOC_021872 NA non-coding downstream 189086 36319178 ~ 36319588 (+)
XLOC_021874 NA non-coding downstream 234813 36364905 ~ 36365917 (+)
XLOC_021875 NA non-coding downstream 288027 36418119 ~ 36420278 (+)

Expression


Co-expression Network