G224988 (LOC106605856)


Basic Information

Item Value
gene id G224988
gene name LOC106605856
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12071287 ~ 12081233 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257266
AGAGTATTTCTAAACCAGAGATTGATAGCGGCAGCTGATGAGATATTTGGTGTCGTTGAAGAAACGATAGCAGAGTACCAGGAAGAGGTTTCTCGCACAAAGGAGGAGAACAGGCGTCTACTGATCACGCTTGATATCCTTACTAAACCAGATAAGTTACATAGACAAGAAGacctccagcagctcactgtcactgtgtctgaTGAGGTGGTTTCCCCTGAGCAGCAGGAGTGGATCCCCAGCCTGGGGCAGAAGGACCCAGAACCCACACGGATGAAAGATGAACAGGATGAACCAAGAACCAGTCAGGAGGATGAGAATAATTTCAATGAGTTTATCAATTCTTACGGCTGTGTATCAAGTGGCTATTATCAGGACCCAACTCAGCCCTCACATGGAGAGAGATACTCTCTACCCAGCACCTCAACTGAACAGATCAAAACAGAACCTTATGTAGAAGACTATGGTGTATCAGAACCAATCAGAGAGCCCCAGCCCTTCTCTGCAGTAGATACTGAGTGTTCTGCAGCTCAGAGTGAAAACAGAGGACATATTGACAGGATGGAGTGTGGAGGACCTCTGTCAGGTCTAATGTTAAAGCCACTCAAATCAAAGAGAACAAAGACAGTAAAAGGACAAAGTTCTCATAGTGTTAAGGACAGGAAATTGAACCATCTAAAATCACACTCGAGACCCAGTGTAAGCTGGGATGCTGCTCCTAGTTGTAAGGTATGTGGAAAGCAATTTGACTCCATGGCGTCTTTATTAAATCATGT

Function

NR:

description
zinc finger protein 37 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257266 True 776 TUCP 0.54 3 12071287 12081233

Neighbor

gene id symbol gene type direction distance location
LOC110509712 LOC106576526 coding downstream 3034 12056146 ~ 12068253 (-)
LOC110509608 LOC105029961 coding downstream 93301 11966198 ~ 11977986 (-)
LOC110509399 LOC106576265 coding downstream 120713 11895643 ~ 11950574 (-)
LOC110509511 ptn6 coding downstream 176185 11862989 ~ 11895102 (-)
LOC110509614 ret1 coding downstream 208880 11858718 ~ 11862407 (-)
LOC110509720 LOC106576492 coding upstream 5941 12087174 ~ 12089471 (-)
LOC110509756 LOC106605861 coding upstream 30150 12111383 ~ 12112865 (-)
trnav-uac NA coding upstream 48938 12130171 ~ 12130246 (-)
LOC110509802 LOC106576373 coding upstream 350936 12432169 ~ 12438782 (-)
LOC110503604 LOC106605712 coding upstream 589256 12670489 ~ 12673805 (-)
G224956 NA non-coding downstream 17518 12020965 ~ 12053769 (-)
G224959 NA non-coding downstream 21750 12045392 ~ 12049537 (-)
G224955 NA non-coding downstream 53817 12017257 ~ 12017470 (-)
G224978 LOC106595066 non-coding downstream 74840 11994218 ~ 11996447 (-)
G224969 NA non-coding downstream 85596 11985461 ~ 11985691 (-)
G225019 NA non-coding upstream 55218 12136451 ~ 12139918 (-)
G225032 NA non-coding upstream 82490 12163723 ~ 12169705 (-)
G225048 NA non-coding upstream 146325 12227558 ~ 12227877 (-)
G225061 NA non-coding upstream 185142 12266375 ~ 12308268 (-)
G225068 NA non-coding upstream 198298 12279531 ~ 12280566 (-)
G224954 LOC106576536 other downstream 55186 12014926 ~ 12016101 (-)
LOC110509592 LOC100136300 other downstream 261941 11808113 ~ 11811663 (-)
G224873 NA other downstream 274978 11795890 ~ 11796309 (-)
G224869 NA other downstream 317607 11752851 ~ 11753680 (-)
LOC110509576 LOC106576947 other downstream 329703 11727284 ~ 11741584 (-)
G225099 NA other upstream 255008 12336241 ~ 12340966 (-)
G225127 LOC106605865 other upstream 373155 12454388 ~ 12457791 (-)
G225171 LOC106605713 other upstream 391066 12472299 ~ 12473060 (-)
G226124 NA other upstream 985640 13066873 ~ 13067357 (-)
G226187 NA other upstream 1095945 13177178 ~ 13180272 (-)

Expression


Co-expression Network