G225032


Basic Information

Item Value
gene id G225032
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12163723 ~ 12169705 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257330
ggtcactctcctccctctcctctatgtgctaactctagagatacacctaggtaacaggtcactctcctccctctcctctatatgctaactctagagatacacctaggtaacaggtcactctcctcccctcctctatatgctaactctagagatacacataggtaacaggtcactctcctccctctcctctatttgctaactctagagatacacctaggtaacaggtcactctcctccccctcctctatgtgctaactctagagatacacctaggtaacaggtcactctcatCCCTCTTctctatatgctaactctagagatacacataggtaacaggtcactctcctccctctcctctatgtgctaactctagagatacacataggtaacaggtcactctcctccctctcctctatatgc
>TU257333
ctaTGACATTTGCAATTTTTCAACGTGCAGATCTCGAAAACTCCTCCCAGTACCCGCTCCCTCTTTCGcttctctgtccttcctctcctccctctcctctatgtgctaactctagagatacacataggtaacaggtcactctcctccctctcctctatgtgctaactctagagatacacctaggtaacaggtcactctcctccctctcctctatgtgctaactctagagatacacctaggtaacaggtcactctcctccctctcctctatgtgctaactctagagatacacctaggtaacaggtcactctcctccctctcctctatatgctaactctagagatacacctaggtaacaggtcactctcctccctctcctctatttgctaactctagagatacacctaggtaacaggtcactctcctccccctcctctatgtgctaactctagagatacacctaggtaacaggtcactctcatCCCTCTTctctatatgctaactctagagatacacataggtaacaggtcactctcctccctctcctctatgtgctaactctagagatacacataggtaacaggtcactctcctccctctcctctatatgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257330 False 420 lncRNA 0.47 2 12163723 12168508
TU257333 True 610 lncRNA 0.47 2 12163723 12169705

Neighbor

gene id symbol gene type direction distance location
trnav-uac NA coding downstream 33477 12130171 ~ 12130246 (-)
LOC110509756 LOC106605861 coding downstream 50858 12111383 ~ 12112865 (-)
LOC110509720 LOC106576492 coding downstream 74252 12087174 ~ 12089471 (-)
LOC110503589 LOC106576508 coding downstream 76775 12077084 ~ 12086948 (-)
LOC118945807 LOC106605860 coding downstream 91436 12070204 ~ 12072287 (-)
LOC110509802 LOC106576373 coding upstream 262464 12432169 ~ 12438782 (-)
LOC110503604 LOC106605712 coding upstream 500784 12670489 ~ 12673805 (-)
LOC110505096 tigit coding upstream 518774 12688479 ~ 12690874 (-)
LOC110509848 LOC106575652 coding upstream 521927 12691632 ~ 12700659 (-)
LOC110505108 LOC106578919 coding upstream 557359 12727064 ~ 12732403 (-)
G225019 NA non-coding downstream 23805 12136451 ~ 12139918 (-)
G224953 NA non-coding downstream 55563 12017593 ~ 12108160 (-)
G224956 NA non-coding downstream 109954 12020965 ~ 12053769 (-)
G224959 NA non-coding downstream 114186 12045392 ~ 12049537 (-)
G224955 NA non-coding downstream 146253 12017257 ~ 12017470 (-)
G225048 NA non-coding upstream 57853 12227558 ~ 12227877 (-)
G225061 NA non-coding upstream 96670 12266375 ~ 12308268 (-)
G225068 NA non-coding upstream 109826 12279531 ~ 12280566 (-)
G225096 erf non-coding upstream 156159 12325864 ~ 12328067 (-)
G225088 LOC106576393 non-coding upstream 186110 12355815 ~ 12360793 (-)
G224988 LOC106605856 other downstream 82490 12071287 ~ 12081233 (-)
G224954 LOC106576536 other downstream 147622 12014926 ~ 12016101 (-)
LOC110509592 LOC100136300 other downstream 354377 11808113 ~ 11811663 (-)
G224873 NA other downstream 367414 11795890 ~ 11796309 (-)
G224869 NA other downstream 410043 11752851 ~ 11753680 (-)
G225099 NA other upstream 166536 12336241 ~ 12340966 (-)
G225127 LOC106605865 other upstream 284683 12454388 ~ 12457791 (-)
G225171 LOC106605713 other upstream 302594 12472299 ~ 12473060 (-)
G226124 NA other upstream 897168 13066873 ~ 13067357 (-)
G226187 NA other upstream 1007473 13177178 ~ 13180272 (-)

Expression


Co-expression Network