G224351


Basic Information

Item Value
gene id G224351
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12173018 ~ 12173579 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU256495
cctgtctctctctctctctctctctctctctctccctgtctctctctctctctctctctctctgtctctctctctctctctctccctgtctctctctctctctctctccctgtctctctctctctctctctctccctgtctctctctctctctctctgtctctctctctctctctctctctctctctctctctctccctgtctctctctctctctctctctctctccctgtctctctctctctc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256495 True 244 lncRNA 0.53 2 12173018 12173579

Neighbor

gene id symbol gene type direction distance location
LOC110509740 LOC106605858 coding upstream 64878 12089901 ~ 12108140 (+)
LOC110509764 NA coding upstream 69872 12096927 ~ 12103146 (+)
LOC110537447 LOC106577011 coding upstream 119368 12005269 ~ 12053650 (+)
LOC110509600 LOC106576545 coding upstream 168295 11987253 ~ 12004723 (+)
LOC110509582 mlf2 coding upstream 187905 11927476 ~ 11985113 (+)
LOC118945814 NA coding downstream 69461 12243040 ~ 12247913 (+)
LOC110509826 LOC106576393 coding downstream 85555 12259134 ~ 12357204 (+)
LOC110503596 LOC106576258 coding downstream 195262 12368841 ~ 12430981 (+)
LOC110509831 LOC106576382 coding downstream 266367 12439946 ~ 12460864 (+)
LOC110509786 LOC106576357 coding downstream 289493 12463072 ~ 12488166 (+)
G224328 NA non-coding upstream 49965 12122636 ~ 12123053 (+)
G224317 NA non-coding upstream 62995 12109781 ~ 12110023 (+)
G224307 dedd2 non-coding upstream 64642 12099462 ~ 12108376 (+)
G224309 NA non-coding upstream 84048 12084778 ~ 12088970 (+)
G224308 LOC106576519 non-coding upstream 94997 12070216 ~ 12078021 (+)
G224366 NA non-coding downstream 44373 12217952 ~ 12223546 (+)
G224377 NA non-coding downstream 80359 12253938 ~ 12254451 (+)
G224405 NA non-coding downstream 116715 12290294 ~ 12296245 (+)
G224409 NA non-coding downstream 133609 12307188 ~ 12311324 (+)
G224425 NA non-coding downstream 175082 12348661 ~ 12349516 (+)
G224297 NA other upstream 150574 12020965 ~ 12022444 (+)
mrpl51 LOC100194563 other upstream 382379 11788492 ~ 11790660 (+)
LOC110520911 zyx other upstream 582674 11580308 ~ 11600483 (+)
G224052 gstk1 other upstream 736558 11433120 ~ 11436460 (+)
grik5 grik5 other downstream 487041 12497538 ~ 12664742 (+)
G225451 NA other downstream 792453 12966032 ~ 12966533 (+)
LOC110509972 LOC106596703 other downstream 802594 12972069 ~ 12977823 (+)

Expression


Co-expression Network