G224366


Basic Information

Item Value
gene id G224366
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12217952 ~ 12223546 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU256515
cactacatatcactaacactgtcttcccacactacaTATCACCAACACTGTCTTTCCACATTACACTACATATCATgaacactgtcttcccacattACATATCACTgacactgtcttcccacactacatatcacgaacactgtcttcccacactacatatcacaaacactgtcttcccacactacatatcacgaacactgtcttcccacactacatatcactaacactgtcttcccacactacatatcactaacactgtcttcccacattacactacatatcactaacactgtcttcccacacttcatatcactaacactgtcttcccacattACACTACatatcaCGAACGCTGTCTTCCcacactacatatcactaacactgtcttcccacactacactacATTTCACcaacactgtcttcccacattacactacatatcactaacactgtcttcccacactacactacatatcacgaacactgtcttcccacactacctatcactaacactgtcttcccacattACACTACATATCATgaacactgtcttcccacactacatatcactaacactgtcttcccacactacCCTACATTTCACcaacactgtcttcccacactacactacatatcactaacactgtcttcccacatgacactacatatcactaacactgtcttcccacactacactacatatcactaacactgtcttcccacactacatatcactaacactgtcttcccacattACACTACATATCACgaacactgtcttcccacactacactacatatcactaacactgtcttcccacacttcatatcactaacactgtcttcccacattACACTACATATCACgaacactgtcttcccacactacaTATCTCTAGCACTGTCTTCCCACACTtcactacat
>TU256522
cactacatatcactaacactgtcttcccacactacaTATCACCAACACTGTCTTTCCACATTACACTACATATCATgaacactgtcttcccacattACATATCACTgacactgtcttcccacactacatatcacgaacactgtcttcccacactacatatcacaaacactgtcttcccacactacatatcacgaacactgtcttcccacactacatatcactaacactgtcttcccacactacatatcactaacactgtcttcccacattacactacatatcactaacactgtcttcccacacttcatatcactaacactgtcttcccacactacatatcactaacactgtcttcccacacttcatatcactaacactgtcttcccacactacatatcactaacactgtcttcccacattACACTACATATCACGAACGCTGTCTTCCcacactacatatcactaacactgtcttcccacactacactacatatcactaacactgtcttcccacactacactacatatcactaacactgtcttcccacactacatatcactaacactgtcttcccacattACACTACATATCACgaacactgtcttcccacactacactacatatcactaacactgtcttcccacacttcatatcactaacactgtcttcccacattACACTACATATCACgaacactgtcttcccacactacaTATCTCTAGCACTGTCTTCCCACACTtcactacat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256515 False 924 lncRNA 0.42 3 12217952 12223546
TU256522 True 749 lncRNA 0.38 4 12217952 12223546

Neighbor

gene id symbol gene type direction distance location
LOC110509740 LOC106605858 coding upstream 109812 12089901 ~ 12108140 (+)
LOC110509764 NA coding upstream 114806 12096927 ~ 12103146 (+)
LOC110537447 LOC106577011 coding upstream 164302 12005269 ~ 12053650 (+)
LOC110509600 LOC106576545 coding upstream 213229 11987253 ~ 12004723 (+)
LOC110509582 mlf2 coding upstream 232839 11927476 ~ 11985113 (+)
LOC118945814 NA coding downstream 19494 12243040 ~ 12247913 (+)
LOC110509826 LOC106576393 coding downstream 35588 12259134 ~ 12357204 (+)
LOC110503596 LOC106576258 coding downstream 145295 12368841 ~ 12430981 (+)
LOC110509831 LOC106576382 coding downstream 216400 12439946 ~ 12460864 (+)
LOC110509786 LOC106576357 coding downstream 239526 12463072 ~ 12488166 (+)
G224351 NA non-coding upstream 44373 12173018 ~ 12173579 (+)
G224328 NA non-coding upstream 94899 12122636 ~ 12123053 (+)
G224317 NA non-coding upstream 107929 12109781 ~ 12110023 (+)
G224307 dedd2 non-coding upstream 109576 12099462 ~ 12108376 (+)
G224309 NA non-coding upstream 128982 12084778 ~ 12088970 (+)
G224377 NA non-coding downstream 30392 12253938 ~ 12254451 (+)
G224405 NA non-coding downstream 66748 12290294 ~ 12296245 (+)
G224409 NA non-coding downstream 83642 12307188 ~ 12311324 (+)
G224425 NA non-coding downstream 125115 12348661 ~ 12349516 (+)
G224426 NA non-coding downstream 126057 12349603 ~ 12351053 (+)
G224297 NA other upstream 195508 12020965 ~ 12022444 (+)
mrpl51 LOC100194563 other upstream 427313 11788492 ~ 11790660 (+)
LOC110520911 zyx other upstream 627608 11580308 ~ 11600483 (+)
G224052 gstk1 other upstream 781492 11433120 ~ 11436460 (+)
grik5 grik5 other downstream 437074 12497538 ~ 12664742 (+)
G225451 NA other downstream 742486 12966032 ~ 12966533 (+)
LOC110509972 LOC106596703 other downstream 752627 12972069 ~ 12977823 (+)

Expression


Co-expression Network