G225068


Basic Information

Item Value
gene id G225068
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12279531 ~ 12280566 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257378
AAAAAAGTATTGTGACCCAGAGCAgggcactgtgtgtgtctgtcagtggcCATTTCGGCGAGGAGCTTACCACTGATGTCATCCTATAACACCagtcagagaggagggaaggatgtAAACataggagagagtgaggaagagggacgttttgagggagggaggaaagagagcaagaggaggGGAAATTAACGGGAAAGGTAGGTAGTGGGGCAATGTAAacatgagggagagatggagagaggggaaaggtaggtattggggcaatgtaaacatgatgaagagatggagagaggggaaaggtaggtactggggcaatgtaaacatgaggaagagatggagagaggggaaaggaaggTATTGGGGCAATGTAAAcatgatgaagagatggagagaggggaaaggtaggtattggggcaatgtaaacatgaggaagagctggagagaggggaaaggtaggtattggggcaatgtaaacatgaggaagagatggagagaggggaaaggtaggtattggggcaatgtaaacatgagaaagagatggagagaggggaaaggtaggtagtggggcaatgtaaacatgatgaagagatggagagaggggaaaggtaggtattggggcaatgtaaacatgatgaagagatggagagaggggaaaggtaggtattggggcaatgtaaacatgaggaagagatggagagaggggaaaggtaggtattggggcaatgtaaacatgagaaagagatggagagaggggaaaggtaggtagtggggcaatgtaaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC106574600

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257378 True 781 lncRNA 0.48 2 12279531 12280566

Neighbor

gene id symbol gene type direction distance location
trnav-uac NA coding downstream 149285 12130171 ~ 12130246 (-)
LOC110509756 LOC106605861 coding downstream 166666 12111383 ~ 12112865 (-)
LOC110509720 LOC106576492 coding downstream 190060 12087174 ~ 12089471 (-)
LOC110503589 LOC106576508 coding downstream 192583 12077084 ~ 12086948 (-)
LOC118945807 LOC106605860 coding downstream 207244 12070204 ~ 12072287 (-)
LOC110509802 LOC106576373 coding upstream 151603 12432169 ~ 12438782 (-)
LOC110503604 LOC106605712 coding upstream 389923 12670489 ~ 12673805 (-)
LOC110505096 tigit coding upstream 407913 12688479 ~ 12690874 (-)
LOC110509848 LOC106575652 coding upstream 411066 12691632 ~ 12700659 (-)
LOC110505108 LOC106578919 coding upstream 446498 12727064 ~ 12732403 (-)
G225048 NA non-coding downstream 51654 12227558 ~ 12227877 (-)
G225032 NA non-coding downstream 109826 12163723 ~ 12169705 (-)
G225019 NA non-coding downstream 139613 12136451 ~ 12139918 (-)
G224956 NA non-coding downstream 225762 12020965 ~ 12053769 (-)
G225096 erf non-coding upstream 45298 12325864 ~ 12328067 (-)
G225088 LOC106576393 non-coding upstream 75249 12355815 ~ 12360793 (-)
G225148 NA non-coding upstream 133027 12413593 ~ 12414411 (-)
G225124 LOC106576258 non-coding upstream 148262 12428828 ~ 12430948 (-)
G225170 LOC106576357 non-coding upstream 189944 12470510 ~ 12472088 (-)
G224988 LOC106605856 other downstream 198298 12071287 ~ 12081233 (-)
G224954 LOC106576536 other downstream 263430 12014926 ~ 12016101 (-)
LOC110509592 LOC100136300 other downstream 470185 11808113 ~ 11811663 (-)
G224873 NA other downstream 483222 11795890 ~ 11796309 (-)
G224869 NA other downstream 525851 11752851 ~ 11753680 (-)
G225099 NA other upstream 55675 12336241 ~ 12340966 (-)
G225127 LOC106605865 other upstream 173822 12454388 ~ 12457791 (-)
G225171 LOC106605713 other upstream 191733 12472299 ~ 12473060 (-)
G226124 NA other upstream 786307 13066873 ~ 13067357 (-)
G226187 NA other upstream 896612 13177178 ~ 13180272 (-)

Expression


Co-expression Network