Gene
RNA
| Item | Value |
|---|---|
| gene id | G225275 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 12648868 ~ 12649586 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| glutamate receptor ionotropic, kainate 5-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU257626 | True | 719 | lncRNA | 0.35 | 1 | 12648868 | 12649586 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509802 | LOC106576373 | coding | downstream | 210086 | 12432169 ~ 12438782 (-) |
| trnav-uac | NA | coding | downstream | 518622 | 12130171 ~ 12130246 (-) |
| LOC110509756 | LOC106605861 | coding | downstream | 536003 | 12111383 ~ 12112865 (-) |
| LOC110509720 | LOC106576492 | coding | downstream | 559397 | 12087174 ~ 12089471 (-) |
| LOC110503589 | LOC106576508 | coding | downstream | 561920 | 12077084 ~ 12086948 (-) |
| LOC110503604 | LOC106605712 | coding | upstream | 20903 | 12670489 ~ 12673805 (-) |
| LOC110505096 | tigit | coding | upstream | 38893 | 12688479 ~ 12690874 (-) |
| LOC110509848 | LOC106575652 | coding | upstream | 42046 | 12691632 ~ 12700659 (-) |
| LOC110505108 | LOC106578919 | coding | upstream | 77478 | 12727064 ~ 12732403 (-) |
| LOC118944453 | LOC106605569 | coding | upstream | 86167 | 12735753 ~ 12745687 (-) |
| G225274 | NA | non-coding | downstream | 371 | 12648052 ~ 12648497 (-) |
| G225273 | NA | non-coding | downstream | 1539 | 12646350 ~ 12647329 (-) |
| G225270 | NA | non-coding | downstream | 5727 | 12642841 ~ 12643141 (-) |
| G225269 | NA | non-coding | downstream | 7699 | 12640682 ~ 12641169 (-) |
| G225236 | NA | non-coding | downstream | 28897 | 12595651 ~ 12619971 (-) |
| G225276 | NA | non-coding | upstream | 303 | 12649889 ~ 12650277 (-) |
| G225277 | NA | non-coding | upstream | 5252 | 12654838 ~ 12655064 (-) |
| G225278 | LOC102205406 | non-coding | upstream | 6545 | 12656131 ~ 12656947 (-) |
| G225279 | NA | non-coding | upstream | 7573 | 12657159 ~ 12657814 (-) |
| G225280 | grik5 | non-coding | upstream | 9077 | 12658663 ~ 12658884 (-) |
| G225171 | LOC106605713 | other | downstream | 175808 | 12472299 ~ 12473060 (-) |
| G225127 | LOC106605865 | other | downstream | 191077 | 12454388 ~ 12457791 (-) |
| G225099 | NA | other | downstream | 307902 | 12336241 ~ 12340966 (-) |
| G224988 | LOC106605856 | other | downstream | 567635 | 12071287 ~ 12081233 (-) |
| G224954 | LOC106576536 | other | downstream | 632767 | 12014926 ~ 12016101 (-) |
| G226124 | NA | other | upstream | 417287 | 13066873 ~ 13067357 (-) |
| G226187 | NA | other | upstream | 527592 | 13177178 ~ 13180272 (-) |
| G226224 | NA | other | upstream | 574298 | 13223884 ~ 13224515 (-) |
| G226294 | LOC100136012 | other | upstream | 694488 | 13344074 ~ 13344375 (-) |
| wu:fe05a04 | LOC106578221 | other | upstream | 1277088 | 13909746 ~ 13927861 (-) |
