G225279


Basic Information

Item Value
gene id G225279
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12657159 ~ 12657814 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257630
ATGAAGAAAGTCATGGTGCTCCCCCCGTGGATAGTGCCATACTCGATGTTGGTCTGGTCGGCCAGGTCGTCAGGAGACTCGATGGGCACCTCCATCCTCTGGACGGTCAGGAAGGCTGCCAGGTTGGCCGTGTAGGAGGAGATGATGATCAGAGTAAACATCCAcctgggagaagagagagacagagttagagagagtaagagaaggagagggcaatagagagagggaaagagagataggaCTAAGGGGAAAGAATGGGAGAAGTGACaccgtcagagagagagagagagagagacagagagagaaagtcagagaAAATATAGTTTGACAGAATCCCAGAcagggagagaaatgagagaggagagggcgacAGAGAGACATTTACTCGGACTGAGACATACAGACTGATACATACTtacccacccatctacacacacagactTACCAGACCCCTGAGACGCAGCGTGTGGACAGGGCACGGGGCATGATCTCAGAGCCCTGCTGCATGAAGCCTCCTACAGGGAACCACAGGCTGTTCCCTAGGGTGTACTGGTTCTCCAGCATGTCCTTGTGCCCCTGCAGACATGGGTGGGGGTTGTACCACTCATAGGGACTT

Function

NR:

description
PREDICTED: glutamate receptor ionotropic, kainate 5-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257630 True 616 lncRNA 0.35 2 12657159 12657814

Neighbor

gene id symbol gene type direction distance location
LOC110509802 LOC106576373 coding downstream 218377 12432169 ~ 12438782 (-)
trnav-uac NA coding downstream 526913 12130171 ~ 12130246 (-)
LOC110509756 LOC106605861 coding downstream 544294 12111383 ~ 12112865 (-)
LOC110509720 LOC106576492 coding downstream 567688 12087174 ~ 12089471 (-)
LOC110503589 LOC106576508 coding downstream 570211 12077084 ~ 12086948 (-)
LOC110503604 LOC106605712 coding upstream 12675 12670489 ~ 12673805 (-)
LOC110505096 tigit coding upstream 30665 12688479 ~ 12690874 (-)
LOC110509848 LOC106575652 coding upstream 33818 12691632 ~ 12700659 (-)
LOC110505108 LOC106578919 coding upstream 69250 12727064 ~ 12732403 (-)
LOC118944453 LOC106605569 coding upstream 77939 12735753 ~ 12745687 (-)
G225278 LOC102205406 non-coding downstream 212 12656131 ~ 12656947 (-)
G225277 NA non-coding downstream 2095 12654838 ~ 12655064 (-)
G225276 NA non-coding downstream 6882 12649889 ~ 12650277 (-)
G225275 NA non-coding downstream 7573 12648868 ~ 12649586 (-)
G225274 NA non-coding downstream 8662 12648052 ~ 12648497 (-)
G225280 grik5 non-coding upstream 849 12658663 ~ 12658884 (-)
G225281 NA non-coding upstream 1390 12659204 ~ 12659547 (-)
G225282 NA non-coding upstream 1882 12659696 ~ 12660671 (-)
G225283 NA non-coding upstream 2991 12660805 ~ 12661045 (-)
G225267 grik5 non-coding upstream 4161 12661975 ~ 12662187 (-)
G225171 LOC106605713 other downstream 184099 12472299 ~ 12473060 (-)
G225127 LOC106605865 other downstream 199368 12454388 ~ 12457791 (-)
G225099 NA other downstream 316193 12336241 ~ 12340966 (-)
G224988 LOC106605856 other downstream 575926 12071287 ~ 12081233 (-)
G224954 LOC106576536 other downstream 641058 12014926 ~ 12016101 (-)
G226124 NA other upstream 409059 13066873 ~ 13067357 (-)
G226187 NA other upstream 519364 13177178 ~ 13180272 (-)
G226224 NA other upstream 566070 13223884 ~ 13224515 (-)
G226294 LOC100136012 other upstream 686260 13344074 ~ 13344375 (-)
wu:fe05a04 LOC106578221 other upstream 1268860 13909746 ~ 13927861 (-)

Expression


Co-expression Network