G224541


Basic Information

Item Value
gene id G224541
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12670867 ~ 12671076 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU256725
GGGTCATCTAGGTATCTATCAGCAAAACATCCAGACCCCTGAACATTGCCCTGACCACCCCATCCAGCTGCACTGAGAAGCAGTCACCATTGTACAGGCTCACTTTCGGGTCCAGGGCCTGGAAGTTGGCCGAGCGCAACACCACCAGCGTCCCCGAAGCCCGGTTCAGAAGCCGCACCACCGCCCGCCGAATGTGGCGTAGTCGGCGAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU256725 True 210 lncRNA 0.60 1 12670867 12671076

Neighbor

gene id symbol gene type direction distance location
grik5 grik5 coding upstream 6125 12497538 ~ 12664742 (+)
LOC110509786 LOC106576357 coding upstream 182701 12463072 ~ 12488166 (+)
LOC110509831 LOC106576382 coding upstream 210003 12439946 ~ 12460864 (+)
LOC110503596 LOC106576258 coding upstream 239886 12368841 ~ 12430981 (+)
LOC110509826 LOC106576393 coding upstream 313663 12259134 ~ 12357204 (+)
LOC110509875 LOC106578696 coding downstream 106192 12777268 ~ 12781208 (+)
LOC110509883 LOC106605563 coding downstream 137852 12808928 ~ 12825486 (+)
LOC110503610 LOC106578751 coding downstream 166976 12838052 ~ 12840215 (+)
si:dkey-250k15.4 LOC106605557 coding downstream 189662 12860738 ~ 12866559 (+)
cxcr3.2 cxcr3a coding downstream 237051 12908127 ~ 12912178 (+)
G224535 NA non-coding upstream 15193 12655334 ~ 12655674 (+)
G224519 NA non-coding upstream 57032 12609286 ~ 12613835 (+)
G224510 NA non-coding upstream 76623 12593640 ~ 12594244 (+)
G224390 NA non-coding upstream 122398 12546521 ~ 12548469 (+)
G224394 NA non-coding upstream 124594 12543449 ~ 12546273 (+)
G224560 NA non-coding downstream 23570 12694646 ~ 12695140 (+)
G224604 LOC106578911 non-coding downstream 81586 12752662 ~ 12755465 (+)
G224610 NA non-coding downstream 91734 12762810 ~ 12763526 (+)
G224634 NA non-coding downstream 125461 12796537 ~ 12796779 (+)
G224653 NA non-coding downstream 168180 12839256 ~ 12839688 (+)
G224297 NA other upstream 648423 12020965 ~ 12022444 (+)
LOC110537447 LOC106577011 other upstream 656062 12005269 ~ 12053650 (+)
G225451 NA other downstream 294956 12966032 ~ 12966533 (+)
LOC110509972 LOC106596703 other downstream 305097 12972069 ~ 12977823 (+)
LOC110509979 LOC106574911 other downstream 330495 12985236 ~ 13022032 (+)
LOC110510042 LOC106578847 other downstream 376424 13047440 ~ 13074579 (+)
G225649 NA other downstream 820495 13491571 ~ 13491980 (+)

Expression


Co-expression Network