G225292


Basic Information

Item Value
gene id G225292
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12673056 ~ 12673590 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257643
GGTGTATTTACATGCACTAGTGTTGCTTTTAATTATATTGGGTGGCACAAAAACAGTCCACAGGAAGCCAGAAGTTAATTACAATTCCATTTCAAATTACTGTGCTGGGTGGCAGGAAACTTGGTCATTATGAAGGTTGGAATTTGAGTCAAAATATCTAAAGGATCGTATTATTAAACAGACTTTCCAAATGTGGGTCTGTTGTAGACCCACTTCCTCTCTGTCCACATATGGTGCACGTGAAGGACTTTTATTTTGACCTGAGGTAAGCAGAGGAAGTCGCTCTACATCAGACCCACGTTTGGAAAATCTGTTTAATAATACAATCCTTTATATATTTTGTCTCAAAGTCGGCCTTCATAATGATCAAAGGTCTTGCCCATCGGCACAGTAAGTTGTAATGGAATTGTATTTAACTTCTGGCTTCTGTGGACTGTTTTTATGCTAGTGTATGTAAATACACCCACGTTGATAAGAGCAACTAGGGCGTCACGAAAACAGTAGGTTTTTAGATGCTACACTTGATGCATAGATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257643 True 535 lncRNA 0.45 1 12673056 12673590

Neighbor

gene id symbol gene type direction distance location
LOC110509802 LOC106576373 coding downstream 234274 12432169 ~ 12438782 (-)
trnav-uac NA coding downstream 542810 12130171 ~ 12130246 (-)
LOC110509756 LOC106605861 coding downstream 560191 12111383 ~ 12112865 (-)
LOC110509720 LOC106576492 coding downstream 583585 12087174 ~ 12089471 (-)
LOC110503589 LOC106576508 coding downstream 586108 12077084 ~ 12086948 (-)
LOC110505096 tigit coding upstream 14889 12688479 ~ 12690874 (-)
LOC110509848 LOC106575652 coding upstream 18042 12691632 ~ 12700659 (-)
LOC110505108 LOC106578919 coding upstream 53474 12727064 ~ 12732403 (-)
LOC118944453 LOC106605569 coding upstream 62163 12735753 ~ 12745687 (-)
LOC118944488 NA coding upstream 79092 12752682 ~ 12753786 (-)
G225290 NA non-coding downstream 3800 12669047 ~ 12669256 (-)
G225287 NA non-coding downstream 5486 12667362 ~ 12667570 (-)
G225284 NA non-coding downstream 6747 12666103 ~ 12666309 (-)
G225266 NA non-coding downstream 8477 12662483 ~ 12664579 (-)
G225267 grik5 non-coding downstream 10869 12661975 ~ 12662187 (-)
G225345 LOC106578696 non-coding upstream 106333 12779923 ~ 12781221 (-)
G225369 LOC106578676 non-coding upstream 140409 12813999 ~ 12820135 (-)
G225368 NA non-coding upstream 140833 12814423 ~ 12823129 (-)
G225371 LOC106578676 non-coding upstream 141347 12814937 ~ 12821075 (-)
G225370 NA non-coding upstream 167721 12841311 ~ 12843899 (-)
G225171 LOC106605713 other downstream 199996 12472299 ~ 12473060 (-)
G225127 LOC106605865 other downstream 215265 12454388 ~ 12457791 (-)
G225099 NA other downstream 332090 12336241 ~ 12340966 (-)
G224988 LOC106605856 other downstream 591823 12071287 ~ 12081233 (-)
G224954 LOC106576536 other downstream 656955 12014926 ~ 12016101 (-)
G226124 NA other upstream 393283 13066873 ~ 13067357 (-)
G226187 NA other upstream 503588 13177178 ~ 13180272 (-)
G226224 NA other upstream 550294 13223884 ~ 13224515 (-)
G226294 LOC100136012 other upstream 670484 13344074 ~ 13344375 (-)
wu:fe05a04 LOC106578221 other upstream 1253084 13909746 ~ 13927861 (-)

Expression


Co-expression Network