Gene
RNA
| Item | Value |
|---|---|
| gene id | G225370 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 12841311 ~ 12843899 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106578929 |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU257787 | True | 301 | lncRNA | 0.46 | 2 | 12841311 | 12843899 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110509869 | NA | coding | downstream | 77330 | 12761519 ~ 12763981 (-) |
| LOC110509853 | NA | coding | downstream | 83131 | 12753798 ~ 12758180 (-) |
| LOC118944488 | NA | coding | downstream | 87525 | 12752682 ~ 12753786 (-) |
| LOC118944453 | LOC106605569 | coding | downstream | 95624 | 12735753 ~ 12745687 (-) |
| LOC110505108 | LOC106578919 | coding | downstream | 108908 | 12727064 ~ 12732403 (-) |
| LOC110509927 | LOC106578751 | coding | upstream | 12795 | 12856694 ~ 12860589 (-) |
| tlr21 | LOC106605556 | coding | upstream | 21043 | 12864942 ~ 12875688 (-) |
| LOC110503616 | LOC106605556 | coding | upstream | 36986 | 12880885 ~ 12883016 (-) |
| cxcr3.1 | cxcr3b | coding | upstream | 81555 | 12925454 ~ 12929064 (-) |
| LOC110510146 | mrpl17 | coding | upstream | 495294 | 13339193 ~ 13341845 (-) |
| G225368 | NA | non-coding | downstream | 18182 | 12814423 ~ 12823129 (-) |
| G225371 | LOC106578676 | non-coding | downstream | 20236 | 12814937 ~ 12821075 (-) |
| G225369 | LOC106578676 | non-coding | downstream | 21176 | 12813999 ~ 12820135 (-) |
| G225345 | LOC106578696 | non-coding | downstream | 60090 | 12779923 ~ 12781221 (-) |
| G225292 | NA | non-coding | downstream | 167721 | 12673056 ~ 12673590 (-) |
| G225391 | NA | non-coding | upstream | 3537 | 12847436 ~ 12847695 (-) |
| G226019 | NA | non-coding | upstream | 67571 | 12911470 ~ 12912132 (-) |
| G226055 | NA | non-coding | upstream | 113544 | 12957443 ~ 12957679 (-) |
| G226067 | NA | non-coding | upstream | 127202 | 12971101 ~ 12971823 (-) |
| G226065 | LOC106605724 | non-coding | upstream | 128659 | 12972558 ~ 12985792 (-) |
| G225171 | LOC106605713 | other | downstream | 368251 | 12472299 ~ 12473060 (-) |
| G225127 | LOC106605865 | other | downstream | 383520 | 12454388 ~ 12457791 (-) |
| G225099 | NA | other | downstream | 500345 | 12336241 ~ 12340966 (-) |
| G224988 | LOC106605856 | other | downstream | 760078 | 12071287 ~ 12081233 (-) |
| G224954 | LOC106576536 | other | downstream | 825210 | 12014926 ~ 12016101 (-) |
| G226124 | NA | other | upstream | 222974 | 13066873 ~ 13067357 (-) |
| G226187 | NA | other | upstream | 333279 | 13177178 ~ 13180272 (-) |
| G226224 | NA | other | upstream | 379985 | 13223884 ~ 13224515 (-) |
| G226294 | LOC100136012 | other | upstream | 500175 | 13344074 ~ 13344375 (-) |
| wu:fe05a04 | LOC106578221 | other | upstream | 1082775 | 13909746 ~ 13927861 (-) |
