Gene
RNA
| Item | Value |
|---|---|
| gene id | G224629 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 12879461 ~ 12879696 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU256828 | True | 236 | lncRNA | 0.36 | 1 | 12879461 | 12879696 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| si:dkey-250k15.4 | LOC106605557 | coding | upstream | 12902 | 12860738 ~ 12866559 (+) |
| LOC110503610 | LOC106578751 | coding | upstream | 39246 | 12838052 ~ 12840215 (+) |
| LOC110509883 | LOC106605563 | coding | upstream | 53975 | 12808928 ~ 12825486 (+) |
| LOC110509875 | LOC106578696 | coding | upstream | 98253 | 12777268 ~ 12781208 (+) |
| grik5 | grik5 | coding | upstream | 214719 | 12497538 ~ 12664742 (+) |
| cxcr3.2 | cxcr3a | coding | downstream | 28431 | 12908127 ~ 12912178 (+) |
| LOC110509966 | NA | coding | downstream | 41718 | 12921414 ~ 12924048 (+) |
| LOC110509972 | LOC106596703 | coding | downstream | 92373 | 12972069 ~ 12977823 (+) |
| LOC110509979 | LOC106574911 | coding | downstream | 105540 | 12985236 ~ 13022032 (+) |
| LOC110503622 | LOC106592383 | coding | downstream | 145629 | 13025325 ~ 13026634 (+) |
| G224656 | NA | non-coding | upstream | 2337 | 12876896 ~ 12877124 (+) |
| G224628 | NA | non-coding | upstream | 3780 | 12873787 ~ 12875681 (+) |
| G224653 | NA | non-coding | upstream | 39773 | 12839256 ~ 12839688 (+) |
| G224634 | NA | non-coding | upstream | 82682 | 12796537 ~ 12796779 (+) |
| G224610 | NA | non-coding | upstream | 115935 | 12762810 ~ 12763526 (+) |
| G225398 | NA | non-coding | downstream | 932 | 12880628 ~ 12880846 (+) |
| G225429 | cxcr3b | non-coding | downstream | 45765 | 12925461 ~ 12926687 (+) |
| G225439 | NA | non-coding | downstream | 63272 | 12942968 ~ 12943439 (+) |
| G225440 | NA | non-coding | downstream | 64266 | 12943962 ~ 12944220 (+) |
| G225441 | NA | non-coding | downstream | 65075 | 12944771 ~ 12944978 (+) |
| LOC110503596 | LOC106576258 | other | upstream | 497637 | 12368841 ~ 12430981 (+) |
| LOC110509826 | LOC106576393 | other | upstream | 525142 | 12259134 ~ 12357204 (+) |
| G224297 | NA | other | upstream | 857017 | 12020965 ~ 12022444 (+) |
| LOC110537447 | LOC106577011 | other | upstream | 864656 | 12005269 ~ 12053650 (+) |
| G225451 | NA | other | downstream | 86336 | 12966032 ~ 12966533 (+) |
| LOC110510042 | LOC106578847 | other | downstream | 167804 | 13047440 ~ 13074579 (+) |
| G225649 | NA | other | downstream | 611875 | 13491571 ~ 13491980 (+) |
