G226019


Basic Information

Item Value
gene id G226019
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12911470 ~ 12912132 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258551
CCCCAATGTTTTATTCTACTTCCTAAGATTTCTACAACACAGAAATACATGTATACAATCCTATGTACATATGTGTTGTGCTGACTGATGTATAACAATCTCATCTAAAGAAGTGAATTAGAAAATGTTGAATAACAGTCTGGTACCAAAGGACACGTGGACATTTGCCATAAGTAAAGCTGCATGTCTGTCATGACTTACTTAACACCTTTGTTTCCCCTCTAAAACAAGTGAAAAAATGAAGCAATCAAACAAAGAAAAAACTATTGCTGCAGGATTTGAAAGGTATCAGTGTTTGCTGCCTTCAAAAACACAAGGCAACATATGAGTAACACATATAGTGATGACTTGGCCCTTTTGAGGAAGTAGGTttcatacatttaaaaatatatattttgcaagAAATTATCCAGTTCCTTGAAATTATAGTCATCAACTTATCAGGAAACCAAACAGCTTGAGAAATTGTTCACTGCTCACCTTCATATTATGCAGTCTTTGCTGCTCACACTAGAGGCAGATGGGGTTAACATGGTCACACGAGAGGCAGATGGGGTTTTAACTTGGAAGGCTATACGATTGGATGGACAGTAGAATTTCATTAACCAAAATTACAAGAAGAGAGTGAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258551 True 631 lncRNA 0.36 2 12911470 12912132

Neighbor

gene id symbol gene type direction distance location
LOC110503616 LOC106605556 coding downstream 28454 12880885 ~ 12883016 (-)
tlr21 LOC106605556 coding downstream 35782 12864942 ~ 12875688 (-)
LOC110509927 LOC106578751 coding downstream 50881 12856694 ~ 12860589 (-)
LOC110509869 NA coding downstream 147489 12761519 ~ 12763981 (-)
LOC110509853 NA coding downstream 153290 12753798 ~ 12758180 (-)
cxcr3.1 cxcr3b coding upstream 13322 12925454 ~ 12929064 (-)
LOC110510146 mrpl17 coding upstream 427061 13339193 ~ 13341845 (-)
LOC110510138 trp-ii coding upstream 433977 13346109 ~ 13347872 (-)
LOC110503661 trp-i coding upstream 447750 13359882 ~ 13360962 (-)
LOC110510120 LOC106577461 coding upstream 464723 13376855 ~ 13378759 (-)
G225391 NA non-coding downstream 63775 12847436 ~ 12847695 (-)
G225370 NA non-coding downstream 67571 12841311 ~ 12843899 (-)
G225368 NA non-coding downstream 88341 12814423 ~ 12823129 (-)
G225371 LOC106578676 non-coding downstream 90395 12814937 ~ 12821075 (-)
G225369 LOC106578676 non-coding downstream 91335 12813999 ~ 12820135 (-)
G226055 NA non-coding upstream 45311 12957443 ~ 12957679 (-)
G226067 NA non-coding upstream 58969 12971101 ~ 12971823 (-)
G226065 LOC106605724 non-coding upstream 60426 12972558 ~ 12985792 (-)
G226106 LOC106578882 non-coding upstream 122441 13034573 ~ 13036569 (-)
G226123 NA non-coding upstream 146802 13058934 ~ 13059167 (-)
G225171 LOC106605713 other downstream 438410 12472299 ~ 12473060 (-)
G225127 LOC106605865 other downstream 453679 12454388 ~ 12457791 (-)
G225099 NA other downstream 570504 12336241 ~ 12340966 (-)
G224988 LOC106605856 other downstream 830237 12071287 ~ 12081233 (-)
G224954 LOC106576536 other downstream 895369 12014926 ~ 12016101 (-)
G226124 NA other upstream 154741 13066873 ~ 13067357 (-)
G226187 NA other upstream 265046 13177178 ~ 13180272 (-)
G226224 NA other upstream 311752 13223884 ~ 13224515 (-)
G226294 LOC100136012 other upstream 431942 13344074 ~ 13344375 (-)
wu:fe05a04 LOC106578221 other upstream 1014542 13909746 ~ 13927861 (-)

Expression


Co-expression Network