G225440


Basic Information

Item Value
gene id G225440
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12943962 ~ 12944220 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257873
ccaaaacataaagcaaaatctacaatggaatggttcaaaaataaacatatccaggtgttagaatggccaagtcaaagtccagacctgaatccaatcgagaatctgtggaaagaactgaaaactgctgtttacaaatgctctccatccaaactcactgagcttgagctgttttgcaaggaggaatgggaaaacatttcagtctctcgatgtgcaaaactgatagagacataccccaagcgacttacagctgtaatcgcag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257873 True 259 lncRNA 0.45 1 12943962 12944220

Neighbor

gene id symbol gene type direction distance location
LOC110509966 NA coding upstream 19914 12921414 ~ 12924048 (+)
cxcr3.2 cxcr3a coding upstream 31784 12908127 ~ 12912178 (+)
si:dkey-250k15.4 LOC106605557 coding upstream 77403 12860738 ~ 12866559 (+)
LOC110503610 LOC106578751 coding upstream 103747 12838052 ~ 12840215 (+)
LOC110509883 LOC106605563 coding upstream 118476 12808928 ~ 12825486 (+)
LOC110509972 LOC106596703 coding downstream 27849 12972069 ~ 12977823 (+)
LOC110509979 LOC106574911 coding downstream 41016 12985236 ~ 13022032 (+)
LOC110503622 LOC106592383 coding downstream 81105 13025325 ~ 13026634 (+)
LOC110509994 LOC106595974 coding downstream 87857 13032077 ~ 13041681 (+)
LOC110510042 LOC106578847 coding downstream 103220 13047440 ~ 13074579 (+)
G225439 NA non-coding upstream 523 12942968 ~ 12943439 (+)
G225429 cxcr3b non-coding upstream 17275 12925461 ~ 12926687 (+)
G225398 NA non-coding upstream 63116 12880628 ~ 12880846 (+)
G224629 NA non-coding upstream 64266 12879461 ~ 12879696 (+)
G224656 NA non-coding upstream 66838 12876896 ~ 12877124 (+)
G225441 NA non-coding downstream 551 12944771 ~ 12944978 (+)
G225453 NA non-coding downstream 25335 12969555 ~ 12969831 (+)
G225455 NA non-coding downstream 27508 12971728 ~ 12971972 (+)
G225473 NA non-coding downstream 122253 13066473 ~ 13066920 (+)
G225475 NA non-coding downstream 124075 13068295 ~ 13068550 (+)
grik5 grik5 other upstream 282795 12497538 ~ 12664742 (+)
LOC110503596 LOC106576258 other upstream 562138 12368841 ~ 12430981 (+)
LOC110509826 LOC106576393 other upstream 589643 12259134 ~ 12357204 (+)
G224297 NA other upstream 921518 12020965 ~ 12022444 (+)
LOC110537447 LOC106577011 other upstream 929157 12005269 ~ 12053650 (+)
G225451 NA other downstream 21812 12966032 ~ 12966533 (+)
G225649 NA other downstream 547351 13491571 ~ 13491980 (+)

Expression


Co-expression Network