G226067


Basic Information

Item Value
gene id G226067
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12971101 ~ 12971823 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258602
ATATATCGTTTAATGTTGTcacggtcatcctcctcttcatctgaagaggagaggcgagatggatcggaagaccaaaatgcggcgtggtaagtgtccattgtaaatctttaatcaagaaagactgaacactatacaaacgaacaacaaaaacaataaaccaaattcgaccgtgaagctacaaaatgagacctgtgctgaaacaagccatcaacatagacaatcacccacaaacaaacagtgcaacccaggctacctaagtatgattctcaatcagagacaactaatgacacctgcctctgattgagaaccatactaggccgaaaacatagaaataccccaaaacatagaaaaacaaacatagactgcccacccaactcacgccctgaccatactaaataaatacaaaacaacggaaataaaggtcagaacgtgacaaatgtTATACATATAAAATAGATATTAAAACGTTTTGTAGTGGGCATTAACTGTTTGGCTAGCTATTTTCCGTTAAAACATGCTGAGGAACAGTAACGGTAAGTTATCTAAATCAATAACATTAAATTAGCTGGGCTCCGAACATGCAAGAAACTGACGACTGGTTAACAGTTGTCATTTTGCGAATCAATACTGGAGACTATTGGAAAAATATAATTGAGTGAGGTTATTAATTAATAGCTAACCGGTTACTCTTCTCTTAAAACATTTTATAATTTCACATGGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258602 True 723 lncRNA 0.52 1 12971101 12971823

Neighbor

gene id symbol gene type direction distance location
cxcr3.1 cxcr3b coding downstream 42037 12925454 ~ 12929064 (-)
LOC110503616 LOC106605556 coding downstream 88085 12880885 ~ 12883016 (-)
tlr21 LOC106605556 coding downstream 95413 12864942 ~ 12875688 (-)
LOC110509927 LOC106578751 coding downstream 110512 12856694 ~ 12860589 (-)
LOC110509869 NA coding downstream 207120 12761519 ~ 12763981 (-)
LOC110510146 mrpl17 coding upstream 367370 13339193 ~ 13341845 (-)
LOC110510138 trp-ii coding upstream 374286 13346109 ~ 13347872 (-)
LOC110503661 trp-i coding upstream 388059 13359882 ~ 13360962 (-)
LOC110510120 LOC106577461 coding upstream 405032 13376855 ~ 13378759 (-)
LOC110510106 LOC106577440 coding upstream 416586 13388409 ~ 13410671 (-)
G226055 NA non-coding downstream 13422 12957443 ~ 12957679 (-)
G226019 NA non-coding downstream 58969 12911470 ~ 12912132 (-)
G225391 NA non-coding downstream 123406 12847436 ~ 12847695 (-)
G225370 NA non-coding downstream 127202 12841311 ~ 12843899 (-)
G225368 NA non-coding downstream 147972 12814423 ~ 12823129 (-)
G226065 LOC106605724 non-coding upstream 735 12972558 ~ 12985792 (-)
G226106 LOC106578882 non-coding upstream 62750 13034573 ~ 13036569 (-)
G226123 NA non-coding upstream 87111 13058934 ~ 13059167 (-)
G226126 NA non-coding upstream 96471 13068294 ~ 13068594 (-)
G226188 NA non-coding upstream 209165 13180988 ~ 13181809 (-)
G225171 LOC106605713 other downstream 498041 12472299 ~ 12473060 (-)
G225127 LOC106605865 other downstream 513310 12454388 ~ 12457791 (-)
G225099 NA other downstream 630135 12336241 ~ 12340966 (-)
G224988 LOC106605856 other downstream 889868 12071287 ~ 12081233 (-)
G224954 LOC106576536 other downstream 955000 12014926 ~ 12016101 (-)
G226124 NA other upstream 95050 13066873 ~ 13067357 (-)
G226187 NA other upstream 205355 13177178 ~ 13180272 (-)
G226224 NA other upstream 252061 13223884 ~ 13224515 (-)
G226294 LOC100136012 other upstream 372251 13344074 ~ 13344375 (-)
wu:fe05a04 LOC106578221 other upstream 954851 13909746 ~ 13927861 (-)

Expression


Co-expression Network