G226065 (LOC106605724)


Basic Information

Item Value
gene id G226065
gene name LOC106605724
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 12972558 ~ 12985792 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258600
CCCGTGTCTCCGTCCCTATGATATTCTACATTGTCAGTGAGTTATGAGCGACACAACGCAAAACTGATTGtgagatagctaacgttagccagcagTGGCTACCAAAGAGGGTCGTTACTGATTGCGTTCGGTCCCCGCCAACGCTTCTCCTTCTGAAACGACTCTGTCGCATCCATCAGCGCCCGGTTGGATATTGGTTGCTCGCCGTCACAGCTCTTCCTGCACACGGGACAGTTCTGCCCCGGCCCATTCCAGCATTTCTCCAAACACTCCTTGCAGAAGCTGTGGCTGCAAGAAAGAAGAACGGGCCCCCGGTAGAGATCTTTACAGACCGGACAGGTCAGGTCCTCCTGAAGGAGGGATGGAACCTCTGACATCTCCTCATCCCAACCACATTCAGCCATGGTGTCGCTGTCGAATCTGC

Function

NR:

description
zinc-binding protein A33-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258600 True 424 lncRNA 0.58 2 12972558 12985792

Neighbor

gene id symbol gene type direction distance location
cxcr3.1 cxcr3b coding downstream 43494 12925454 ~ 12929064 (-)
LOC110503616 LOC106605556 coding downstream 89542 12880885 ~ 12883016 (-)
tlr21 LOC106605556 coding downstream 96870 12864942 ~ 12875688 (-)
LOC110509927 LOC106578751 coding downstream 111969 12856694 ~ 12860589 (-)
LOC110509869 NA coding downstream 208577 12761519 ~ 12763981 (-)
LOC110510146 mrpl17 coding upstream 353401 13339193 ~ 13341845 (-)
LOC110510138 trp-ii coding upstream 360317 13346109 ~ 13347872 (-)
LOC110503661 trp-i coding upstream 374090 13359882 ~ 13360962 (-)
LOC110510120 LOC106577461 coding upstream 391063 13376855 ~ 13378759 (-)
LOC110510106 LOC106577440 coding upstream 402617 13388409 ~ 13410671 (-)
G226067 NA non-coding downstream 735 12971101 ~ 12971823 (-)
G226055 NA non-coding downstream 14879 12957443 ~ 12957679 (-)
G226019 NA non-coding downstream 60426 12911470 ~ 12912132 (-)
G225391 NA non-coding downstream 124863 12847436 ~ 12847695 (-)
G225370 NA non-coding downstream 128659 12841311 ~ 12843899 (-)
G226106 LOC106578882 non-coding upstream 48781 13034573 ~ 13036569 (-)
G226123 NA non-coding upstream 73142 13058934 ~ 13059167 (-)
G226126 NA non-coding upstream 82502 13068294 ~ 13068594 (-)
G226188 NA non-coding upstream 195196 13180988 ~ 13181809 (-)
G226208 NA non-coding upstream 202107 13187899 ~ 13188419 (-)
G225171 LOC106605713 other downstream 499498 12472299 ~ 12473060 (-)
G225127 LOC106605865 other downstream 514767 12454388 ~ 12457791 (-)
G225099 NA other downstream 631592 12336241 ~ 12340966 (-)
G224988 LOC106605856 other downstream 891325 12071287 ~ 12081233 (-)
G224954 LOC106576536 other downstream 956457 12014926 ~ 12016101 (-)
G226124 NA other upstream 81081 13066873 ~ 13067357 (-)
G226187 NA other upstream 191386 13177178 ~ 13180272 (-)
G226224 NA other upstream 238092 13223884 ~ 13224515 (-)
G226294 LOC100136012 other upstream 358282 13344074 ~ 13344375 (-)
wu:fe05a04 LOC106578221 other upstream 940882 13909746 ~ 13927861 (-)

Expression


Co-expression Network