Gene
RNA
| Item | Value |
|---|---|
| gene id | G226123 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13058934 ~ 13059167 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU258664 | True | 234 | lncRNA | 0.33 | 1 | 13058934 | 13059167 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cxcr3.1 | cxcr3b | coding | downstream | 129870 | 12925454 ~ 12929064 (-) |
| LOC110503616 | LOC106605556 | coding | downstream | 175918 | 12880885 ~ 12883016 (-) |
| tlr21 | LOC106605556 | coding | downstream | 183246 | 12864942 ~ 12875688 (-) |
| LOC110509927 | LOC106578751 | coding | downstream | 198345 | 12856694 ~ 12860589 (-) |
| LOC110509869 | NA | coding | downstream | 294953 | 12761519 ~ 12763981 (-) |
| LOC110510146 | mrpl17 | coding | upstream | 280026 | 13339193 ~ 13341845 (-) |
| LOC110510138 | trp-ii | coding | upstream | 286942 | 13346109 ~ 13347872 (-) |
| LOC110503661 | trp-i | coding | upstream | 300715 | 13359882 ~ 13360962 (-) |
| LOC110510120 | LOC106577461 | coding | upstream | 317688 | 13376855 ~ 13378759 (-) |
| LOC110510106 | LOC106577440 | coding | upstream | 329242 | 13388409 ~ 13410671 (-) |
| G226106 | LOC106578882 | non-coding | downstream | 22365 | 13034573 ~ 13036569 (-) |
| G226065 | LOC106605724 | non-coding | downstream | 73142 | 12972558 ~ 12985792 (-) |
| G226067 | NA | non-coding | downstream | 87111 | 12971101 ~ 12971823 (-) |
| G226055 | NA | non-coding | downstream | 101255 | 12957443 ~ 12957679 (-) |
| G226019 | NA | non-coding | downstream | 146802 | 12911470 ~ 12912132 (-) |
| G226126 | NA | non-coding | upstream | 9127 | 13068294 ~ 13068594 (-) |
| G226188 | NA | non-coding | upstream | 121821 | 13180988 ~ 13181809 (-) |
| G226208 | NA | non-coding | upstream | 128732 | 13187899 ~ 13188419 (-) |
| G226209 | NA | non-coding | upstream | 129622 | 13188789 ~ 13189160 (-) |
| G226210 | NA | non-coding | upstream | 131753 | 13190920 ~ 13194671 (-) |
| G225171 | LOC106605713 | other | downstream | 585874 | 12472299 ~ 12473060 (-) |
| G225127 | LOC106605865 | other | downstream | 601143 | 12454388 ~ 12457791 (-) |
| G225099 | NA | other | downstream | 717968 | 12336241 ~ 12340966 (-) |
| G224988 | LOC106605856 | other | downstream | 977701 | 12071287 ~ 12081233 (-) |
| G224954 | LOC106576536 | other | downstream | 1042833 | 12014926 ~ 12016101 (-) |
| G226124 | NA | other | upstream | 7706 | 13066873 ~ 13067357 (-) |
| G226187 | NA | other | upstream | 118011 | 13177178 ~ 13180272 (-) |
| G226224 | NA | other | upstream | 164717 | 13223884 ~ 13224515 (-) |
| G226294 | LOC100136012 | other | upstream | 284907 | 13344074 ~ 13344375 (-) |
| wu:fe05a04 | LOC106578221 | other | upstream | 867507 | 13909746 ~ 13927861 (-) |
