G225475


Basic Information

Item Value
gene id G225475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 13068295 ~ 13068550 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257909
tcaaatcggagggtctgttgtccggacctctggcagtctctatgggggtgccacagggttcaattcttggaccgactctcttctctgtatacatcaatgaggtcgctcttgctgctggtgagtctctgatccacctctacgcagacgacaccattctgtatacttccggcccttctttggaccctgtgttaacaaccctccaggcaagcttcaatgccatacaactctccttccgtggcctccaattgctcttaaa

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257909 True 256 lncRNA 0.52 1 13068295 13068550

Neighbor

gene id symbol gene type direction distance location
LOC110510031 LOC106578847 coding upstream 4923 13051839 ~ 13063372 (+)
LOC110509994 LOC106595974 coding upstream 26614 13032077 ~ 13041681 (+)
LOC110503622 LOC106592383 coding upstream 41661 13025325 ~ 13026634 (+)
LOC110509979 LOC106574911 coding upstream 46263 12985236 ~ 13022032 (+)
LOC110509972 LOC106596703 coding upstream 90472 12972069 ~ 12977823 (+)
LOC118945979 LOC106577047 coding downstream 53293 13121843 ~ 13178225 (+)
LOC110503633 arhgef1 coding downstream 112426 13180976 ~ 13241773 (+)
LOC110510079 LOC106577375 coding downstream 173225 13241775 ~ 13245669 (+)
LOC110510088 LOC106577399 coding downstream 177740 13246290 ~ 13290275 (+)
LOC110503641 LOC106577338 coding downstream 226962 13295512 ~ 13339225 (+)
G225473 NA non-coding upstream 1375 13066473 ~ 13066920 (+)
G225455 NA non-coding upstream 96323 12971728 ~ 12971972 (+)
G225453 NA non-coding upstream 98464 12969555 ~ 12969831 (+)
G225441 NA non-coding upstream 123317 12944771 ~ 12944978 (+)
G225440 NA non-coding upstream 124075 12943962 ~ 12944220 (+)
G225541 NA non-coding downstream 111886 13180436 ~ 13180641 (+)
G225544 NA non-coding downstream 119475 13188025 ~ 13188426 (+)
G225545 NA non-coding downstream 120141 13188691 ~ 13188901 (+)
G225547 NA non-coding downstream 128463 13197013 ~ 13197260 (+)
G225550 NA non-coding downstream 140843 13209393 ~ 13211917 (+)
LOC110510042 LOC106578847 other upstream 17342 13047440 ~ 13074579 (+)
G225451 NA other upstream 101762 12966032 ~ 12966533 (+)
grik5 grik5 other upstream 407128 12497538 ~ 12664742 (+)
G225649 NA other downstream 423021 13491571 ~ 13491980 (+)
G225651 NA other downstream 425335 13493885 ~ 13494435 (+)
LOC110510206 LOC106577511 other downstream 449098 13517648 ~ 13520035 (+)
G225671 NA other downstream 477323 13545873 ~ 13546978 (+)
G225672 NA other downstream 481548 13550098 ~ 13550582 (+)

Expression


Co-expression Network