G226208


Basic Information

Item Value
gene id G226208
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 13187899 ~ 13188419 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU258753
CTGCAGCACATAAAGCAGCTATGTCCGGCCAGAGTGTTGGAAGAGCTTTCCCAGAATCCCAATCTGGGCTGGTTCTGAACATGGAGGTAGCAATACCGCCGCCCCTCCATGACGGTACGGCCCACATAACTCACCAACCATGCAACGCAGTCCTGCTGCATTCACATCCTCCATCTTAACATCGCTCTATTACTGAGGCACCATGAACCACATACTGCAGCTAGCATCATTATTGGACATTTCTGTTACATTTCTCAGTGAAAATGGCCTAATAATTACTCTCTTCAGATTTAGTCATACATCTCTGTCTCCCCTTTTTCTAACCAGACTTTTAGAACGTAATGTGTATACAACTCATTCAGAGATGTAAATGTTAAGATAGTGTCATGTCCTAGGGCCCCTTCTCGTTGATTACACTGGAAACCTCATCAGCCCTGCTGTACTGTCAACATAGAGGGGTAATTTGAGGCTGCTTGTTCTCGTGATGGTGGTGTGTGTCTAAACCTTCACTCTTGTTCAAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU258753 True 521 lncRNA 0.45 1 13187899 13188419

Neighbor

gene id symbol gene type direction distance location
cxcr3.1 cxcr3b coding downstream 258835 12925454 ~ 12929064 (-)
LOC110503616 LOC106605556 coding downstream 304883 12880885 ~ 12883016 (-)
tlr21 LOC106605556 coding downstream 312211 12864942 ~ 12875688 (-)
LOC110509927 LOC106578751 coding downstream 327310 12856694 ~ 12860589 (-)
LOC110509869 NA coding downstream 423918 12761519 ~ 12763981 (-)
LOC110510146 mrpl17 coding upstream 150774 13339193 ~ 13341845 (-)
LOC110510138 trp-ii coding upstream 157690 13346109 ~ 13347872 (-)
LOC110503661 trp-i coding upstream 171463 13359882 ~ 13360962 (-)
LOC110510120 LOC106577461 coding upstream 188436 13376855 ~ 13378759 (-)
LOC110510106 LOC106577440 coding upstream 199990 13388409 ~ 13410671 (-)
G226188 NA non-coding downstream 6090 13180988 ~ 13181809 (-)
G226126 NA non-coding downstream 119305 13068294 ~ 13068594 (-)
G226123 NA non-coding downstream 128732 13058934 ~ 13059167 (-)
G226106 LOC106578882 non-coding downstream 151330 13034573 ~ 13036569 (-)
G226065 LOC106605724 non-coding downstream 202107 12972558 ~ 12985792 (-)
G226209 NA non-coding upstream 370 13188789 ~ 13189160 (-)
G226210 NA non-coding upstream 2501 13190920 ~ 13194671 (-)
G226215 arhgef1 non-coding upstream 14925 13203344 ~ 13205132 (-)
G226214 NA non-coding upstream 17653 13206072 ~ 13207814 (-)
G226221 NA non-coding upstream 27456 13215875 ~ 13216756 (-)
G226187 NA other downstream 7627 13177178 ~ 13180272 (-)
G226124 NA other downstream 120542 13066873 ~ 13067357 (-)
G225171 LOC106605713 other downstream 714839 12472299 ~ 12473060 (-)
G225127 LOC106605865 other downstream 730108 12454388 ~ 12457791 (-)
G225099 NA other downstream 846933 12336241 ~ 12340966 (-)
G226224 NA other upstream 35465 13223884 ~ 13224515 (-)
G226294 LOC100136012 other upstream 155655 13344074 ~ 13344375 (-)
wu:fe05a04 LOC106578221 other upstream 738255 13909746 ~ 13927861 (-)
LOC110538195 LOC106578103 other upstream 811317 13995196 ~ 14023153 (-)
G227060 NA other upstream 1240374 14428793 ~ 14475166 (-)

Expression


Co-expression Network