Gene
RNA
| Item | Value |
|---|---|
| gene id | G225544 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048567.1 |
| NCBI id | CM023221.2 |
| chromosome length | 85311031 |
| location | 13188025 ~ 13188426 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU257982 | True | 402 | lncRNA | 0.45 | 1 | 13188025 | 13188426 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118945979 | LOC106577047 | coding | upstream | 9800 | 13121843 ~ 13178225 (+) |
| LOC110510042 | LOC106578847 | coding | upstream | 113446 | 13047440 ~ 13074579 (+) |
| LOC110510031 | LOC106578847 | coding | upstream | 124653 | 13051839 ~ 13063372 (+) |
| LOC110509994 | LOC106595974 | coding | upstream | 146344 | 13032077 ~ 13041681 (+) |
| LOC110503622 | LOC106592383 | coding | upstream | 161391 | 13025325 ~ 13026634 (+) |
| LOC110510079 | LOC106577375 | coding | downstream | 53349 | 13241775 ~ 13245669 (+) |
| LOC110510088 | LOC106577399 | coding | downstream | 57864 | 13246290 ~ 13290275 (+) |
| LOC110503641 | LOC106577338 | coding | downstream | 107086 | 13295512 ~ 13339225 (+) |
| LOC110503652 | trp-ii | coding | downstream | 168186 | 13356612 ~ 13358505 (+) |
| LOC110510128 | tryp | coding | downstream | 192705 | 13381131 ~ 13388307 (+) |
| G225541 | NA | non-coding | upstream | 7384 | 13180436 ~ 13180641 (+) |
| G225475 | NA | non-coding | upstream | 119475 | 13068295 ~ 13068550 (+) |
| G225473 | NA | non-coding | upstream | 121105 | 13066473 ~ 13066920 (+) |
| G225455 | NA | non-coding | upstream | 216053 | 12971728 ~ 12971972 (+) |
| G225453 | NA | non-coding | upstream | 218194 | 12969555 ~ 12969831 (+) |
| G225545 | NA | non-coding | downstream | 265 | 13188691 ~ 13188901 (+) |
| G225547 | NA | non-coding | downstream | 8587 | 13197013 ~ 13197260 (+) |
| G225550 | NA | non-coding | downstream | 20967 | 13209393 ~ 13211917 (+) |
| G225551 | NA | non-coding | downstream | 24350 | 13212776 ~ 13212977 (+) |
| G225552 | NA | non-coding | downstream | 28416 | 13216842 ~ 13217053 (+) |
| LOC110509979 | LOC106574911 | other | upstream | 185809 | 12985236 ~ 13022032 (+) |
| LOC110509972 | LOC106596703 | other | upstream | 211246 | 12972069 ~ 12977823 (+) |
| G225451 | NA | other | upstream | 221492 | 12966032 ~ 12966533 (+) |
| grik5 | grik5 | other | upstream | 526858 | 12497538 ~ 12664742 (+) |
| G225649 | NA | other | downstream | 303145 | 13491571 ~ 13491980 (+) |
| G225651 | NA | other | downstream | 305459 | 13493885 ~ 13494435 (+) |
| LOC110510206 | LOC106577511 | other | downstream | 329222 | 13517648 ~ 13520035 (+) |
| G225671 | NA | other | downstream | 357447 | 13545873 ~ 13546978 (+) |
| G225672 | NA | other | downstream | 361672 | 13550098 ~ 13550582 (+) |
