G225545


Basic Information

Item Value
gene id G225545
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048567.1
NCBI id CM023221.2
chromosome length 85311031
location 13188691 ~ 13188901 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU257983
ATGGTAATCAAAGGCCTCTGTGTTTGGCCTGCGCAATTACCCTActatccagacacacacacaccaacacacacacacatttggaaGCGGTTAAATAGGCGGGAGGCTCACTGCGAACCCATTCCATGACAGTCGATTGGCCCTCGTCTATCCAATGTTTCCTTGAAGCATGAAACAGTGACCACTTACGTGGAGAGCAAGAGAAAAATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU257983 True 211 lncRNA 0.37 1 13188691 13188901

Neighbor

gene id symbol gene type direction distance location
LOC118945979 LOC106577047 coding upstream 10466 13121843 ~ 13178225 (+)
LOC110510042 LOC106578847 coding upstream 114112 13047440 ~ 13074579 (+)
LOC110510031 LOC106578847 coding upstream 125319 13051839 ~ 13063372 (+)
LOC110509994 LOC106595974 coding upstream 147010 13032077 ~ 13041681 (+)
LOC110503622 LOC106592383 coding upstream 162057 13025325 ~ 13026634 (+)
LOC110510079 LOC106577375 coding downstream 52874 13241775 ~ 13245669 (+)
LOC110510088 LOC106577399 coding downstream 57389 13246290 ~ 13290275 (+)
LOC110503641 LOC106577338 coding downstream 106611 13295512 ~ 13339225 (+)
LOC110503652 trp-ii coding downstream 167711 13356612 ~ 13358505 (+)
LOC110510128 tryp coding downstream 192230 13381131 ~ 13388307 (+)
G225544 NA non-coding upstream 265 13188025 ~ 13188426 (+)
G225541 NA non-coding upstream 8050 13180436 ~ 13180641 (+)
G225475 NA non-coding upstream 120141 13068295 ~ 13068550 (+)
G225473 NA non-coding upstream 121771 13066473 ~ 13066920 (+)
G225455 NA non-coding upstream 216719 12971728 ~ 12971972 (+)
G225547 NA non-coding downstream 8112 13197013 ~ 13197260 (+)
G225550 NA non-coding downstream 20492 13209393 ~ 13211917 (+)
G225551 NA non-coding downstream 23875 13212776 ~ 13212977 (+)
G225552 NA non-coding downstream 27941 13216842 ~ 13217053 (+)
G225553 NA non-coding downstream 34985 13223886 ~ 13224507 (+)
LOC110509979 LOC106574911 other upstream 186475 12985236 ~ 13022032 (+)
LOC110509972 LOC106596703 other upstream 211912 12972069 ~ 12977823 (+)
G225451 NA other upstream 222158 12966032 ~ 12966533 (+)
grik5 grik5 other upstream 527524 12497538 ~ 12664742 (+)
G225649 NA other downstream 302670 13491571 ~ 13491980 (+)
G225651 NA other downstream 304984 13493885 ~ 13494435 (+)
LOC110510206 LOC106577511 other downstream 328747 13517648 ~ 13520035 (+)
G225671 NA other downstream 356972 13545873 ~ 13546978 (+)
G225672 NA other downstream 361197 13550098 ~ 13550582 (+)

Expression


Co-expression Network